Oncorhynchus tshawytscha (Chinook salmon): 112254383
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Entry
112254383 CDS
T05605
Symbol
trpc4apa
Name
(RefSeq) transient receptor potential cation channel, subfamily C, member 4 associated protein a
KO
K11796
Trpc4-associated protein
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
otw01009
]
112254383 (trpc4apa)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
otw04121
]
112254383 (trpc4apa)
Protein phosphatases and associated proteins [BR:
otw01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
112254383 (trpc4apa)
Ubiquitin system [BR:
otw04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
Cul4 complex
Target recognizing subunit (DCAF)
112254383 (trpc4apa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3689
Motif
Other DBs
NCBI-GeneID:
112254383
NCBI-ProteinID:
XP_024282680
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All DBs
Position
LG07:complement(32377262..32390914)
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AA seq
773 aa
AA seq
DB search
MATLLGSESPWTGGKRSSRNIIAKITHSQIAGQGFSRGTQLPEALLQERDKRAKWHGIPE
LLQKLHESSHPNSDLSHTHSVLKELSSLLSMEAMSFVTEDRKSAQESTFPNTYTFDLFGG
VDLLVEILMRPTLTMQKKKPQMNDDLVKDCLSVLYNCCICTEGVTKSLAARDDFVLFLFT
LMTNKKTFLQTATLIEDILGVKKDMIQLEGIPNLSGLVQSFDQQQLANFCRILSVTISEP
DVRNDDKHTLLAKNAQQKRNASPSRAEVNQVTLLNIPGFIERLCKLATRKVSEATGASNF
LQELEDWYTWLDNALVLDALMQMATEEAEHSSTESSDESSMATSPLRHRLPQSMKIVHEI
MYKVEVLYVLCVLLMGRQRNQVHKMLAEFRLIPGLNNLFDKLIWRKYTSSDHVVHGQNEN
CDCSPEISFKIQFLRLLQSFSDHHENKYLLLNSQELNELSAISLKANIPEVEALVNTDRS
LVCDGKKGLLTRLLAVMKREPPDSSFRFWQARAVESFLRGATSYADQMFLLKRGLLEHIL
FCIIDSGCKSRDVLQSYFDLLGELMKFNIDAFKRFNKYVSTDDKFQTFMTQINSSLVDSN
MLVRCIVLSLDRFESQTEDVKVVEVLSECCLLSYMARVENRLSFLFRLVNVINVQTLTQE
NVSCLNTSLVVLMLARRRGKLPFYLNTLREKEYAEKYPGCLLNNFHNLLRFWQRHYLNKD
KDSTCLENSSCIPFDYWKETVSVLLGSDRTSLCAIASYIDEPFMELDRDLLED
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgttgctggggtctgagtccccttggactggaggaaaacgaagcagtcgcaat
atcattgcaaaaatcacacacagtcagatcgcaggccagggtttcagcagagggacacag
ctcccagaggctctgctccaggagagagataagagggccaaatggcacggcatccctgag
ctgctgcagaagctccatgagagcagccatcctaacagtgacctctcccacacacacagt
gtactaaaggaactatcatccctactttccatggaggcaatgtcttttgtcacagaagac
aggaagagtgctcaagaatccacatttcccaacacatacacctttgacctctttggtgga
gttgatctgctggtagagatcttgatgaggcctacactcactatgcagaagaagaaacct
caaatgaatgatgacttagtcaaggactgcctcagtgttctttataactgctgtatatgt
acggaaggggttacaaagagccttgcagccagagacgactttgtcctgtttctcttcacc
ttgatgacgaacaagaagacgtttctacagactgccactttaatcgaggatattctcggc
gtcaagaaggacatgatccagttggaggggattcctaacctgtctggtctggtccagagc
ttcgaccagcagcagctggctaacttctgccgcatcctctctgtcaccatctcagaaccc
gacgtgagaaatgatgacaaacacaccctgctggccaagaatgcacagcagaaacgcaac
gcaagcccctcacgtgcagaggtcaatcaagttaccctcctgaacatcccgggcttcatc
gagcgcctgtgtaagctggccaccaggaaggtgtctgaggccaccggggcgtcgaacttc
ctgcaggagctggaggactggtacacgtggctggacaacgccttggtgctggacgccctc
atgcagatggccacggaggaggctgagcacagcagcacagagtcatcagatgagagttcg
atggccaccagccctctgaggcaccgtctgccccagtccatgaagatcgtccatgagatc
atgtacaaggtggaggtgctttacgtgctctgtgtgctgctaatgggccgtcagaggaac
caggtacacaagatgttagcagagttccgtctgatcccaggtctcaacaacctgtttgac
aagctgatctggaggaagtacacctcgtccgatcatgtggtgcatggccagaacgagaac
tgtgactgcagtcctgaaatatccttcaagatccagtttctgaggcttctccagagcttc
agtgaccaccacgagaacaagtaccttcttctgaacagtcaggagctgaacgagctgagt
gccatttctctgaaggccaacataccggaggtggaggccttagtcaatacagacagaagt
ctagtgtgcgatgggaagaagggactcctcacacgtctgctcgccgtcatgaagagggag
cctccagactcctcctttaggttctggcaggccagggcagtggagagtttcctccgtgga
gccacctcttatgcggaccagatgtttctgctgaagagggggctgctagaacacatccta
ttctgcatcatagacagtggctgtaagtccagagatgtcctgcagagctactttgacctg
ctgggggaactcatgaagttcaacatcgacgccttcaagaggttcaacaaatatgtcagc
acagacgacaagttccagaccttcatgacccagatcaacagttccctggtggactccaac
atgctggtgcgctgcatcgtcctgtccctcgaccgcttcgagagccagacagaggatgtg
aaagtggtggaggtgctgtctgaatgctgtctgctgtcctacatggcccgggtggagaac
aggctgtccttcctcttcaggctggtcaatgtcatcaatgtgcagactctcacacaggag
aatgtgagctgtctgaacaccagtctggtggtcctgatgctggccaggaggcggggtaaa
cttcccttctacctcaacacattgagagagaaggagtatgcagagaaatatcctggctgc
ctgctaaacaacttccacaacctgctgcgcttctggcagcgccactacctcaacaaggac
aaggacagcacctgtctggagaacagctcctgcatcccctttgactactggaaggagaca
gtgtcagtgcttctgggctcagacaggacttctctgtgtgccatagccagctacatagac
gagcccttcatggagctggacagggacctgctggaggattaa
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