Oncorhynchus tshawytscha (Chinook salmon): 112254391
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Entry
112254391 CDS
T05605
Name
(RefSeq) ras and Rab interactor 2 isoform X1
KO
K23687
Ras and Rab interactor 2/3
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112254391
Membrane trafficking [BR:
otw04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
112254391
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RIN1
VPS9
RA
SH2
Lpg0393_VPS9
RA_2
RA_3
Motif
Other DBs
NCBI-GeneID:
112254391
NCBI-ProteinID:
XP_024282701
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All DBs
Position
LG01:complement(59453045..59500225)
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AA seq
1075 aa
AA seq
DB search
MSISSLIERSEEKKGSFFKLIDSFVWEIGTLKKEMVQKAEQAEGDPEPVILQGLDGQVGG
LFLPPCVGVRAGLAGVRDSGYDSLRRRMSVLDRLVQTHAVWLQLGLSRAEATRKLQSQPT
GTFLVRKSTTLQRKVISLRMHQDSETPVKDFPVKECQYTFSLERSGLSFADLFHLVAFCC
ISRDVLPFTLKLPEAISAARTPTDLEVAKQGAGFWGSERCRRRSSLSSLSRTTTHDKSPS
LRHRSVYTPLVTRTPSQLECSQSNGALCFINPLFLKVHHPEGGNHTFPSYTSHNNNNPQH
LNNSSPTTATTVQVQQHCTSNPEQLKDSPQPHSDSPQSDSPGNSIQHHNSCGSVSRANRV
SLPPPPRPPPPCCAPRRPASPQRHRSMPEKISWINPPKEKQRVGEREKGSSLLSRLGSTL
SISPSSSFLSSSFLSSSPPKKRSISAPISIPLSLSSPSDVDCRLVLDDQTIENAISLSLA
KRALRNATTPDENTEGNSPSTQDQALSSREEGGGRGRGGREEDCIQRLSDMSISTDSTDS
VDFSQGFFPPIAEPSPPTTNNLVLPLTHPYSSMEEDDDEDEADFGVSVENDQDQDLTITP
PGLRTKRRASVGAMVIQQALRGHFRKMSGVFSSLLTPEKRAIRRVLELSRDKGSYFGCLV
QDYLSFLQEGGGCQAWQCHASGLELLQTLRQFITQMKSYLRQSSELEPPIESLIPEDQID
YVLEKAMHKIVLKPLKGVVGVALQEFQVRSGAWQELKENLSLAKARQPHEMGVANAFPPD
PVNIEKIRHKFHTMCKLYSPEKKVTMLLRVCKLIYTIMEHKSGCLYGADDFLPMLTYVLA
QCDMPQLDNEILYMMEVLDPSLLHGEGGYYLTSAYGAMSLIRNFQEEQAARVLSSETRNT
LRQWHCRRTTQHSAPSVNDFQNYLRVALQDSGCTAKTLQVQPYATTEEICQICAYKFKVP
DPENYALILLTEGSCQQLALDTHPQKIKAELHSQPQAAPFHFVFCRVANLNDLAATSFEP
QSNLNDITLTKESEPNLNGVALTPSDPQPNLNLGLSPSLSFSLPPNQHNGNSISI
NT seq
3228 nt
NT seq
+upstream
nt +downstream
nt
atgtccatcagctcactcattgaacgcagcgaggagaagaaagggagcttcttcaagctg
attgactcgtttgtctgggagattgggactctgaagaaggagatggtgcaaaaggctgag
caagcagagggagatccagagcctgtaatactacaggggctagatgggcaggtgggaggt
ctgttcctacctccctgtgttggtgtgcgggcagggcttgctggagttagggattcaggc
tacgactctttgcgtagaaggatgagtgtgctggacaggctggtgcaaacgcatgctgtc
tggctgcagctgggactgagccgggcagaagccacacgcaaactgcaatcacagcccact
gggacgtttctggtgagaaagtcgactaccctgcagaggaaggtgatctctctgcggatg
caccaggactctgagacacccgtcaaagatttccctgtgaaggagtgtcaatacacattc
tccttggagagatcaggcctcagctttgcagacctgtttcatcttgtggctttctgctgc
atcagcagggatgtcttgccattcactctaaagcttcctgaagccatctctgcagccagg
acgccaacagacttggaggtggccaagcaaggagcagggttctggggctctgagcgttgc
cgcaggaggagttctctctcctcgttgtccaggacaaccacccacgacaaatcacctagc
ctgaggcatagatccgtttacactcccctggtcacccgcaccccgtcccagctggaatgt
tcccagtccaacggggctctctgcttcatcaaccccctcttcctaaaggttcaccatcca
gagggtggcaaccacacctttccctcctacaccagccacaacaacaacaacccccagcac
ctaaacaatagcagtccaactacagctacaactgtacaagtacaacagcactgtaccagc
aacccagagcaacttaaagacagccctcaaccccatagcgacagccctcagagtgatagc
cctggcaatagcatccagcatcataacagctgtggcagcgtgagccgggctaacagagtt
tccctcccaccaccccctcgccccccacctccctgctgtgccccccgtcgccctgcctca
cctcaacgccaccgcagcatgcctgagaagatatcctggatcaatccccccaaagagaag
cagagggtgggagagagggagaagggcagtagccttctctcccgcctgggctccactctc
agcatcagtccttcctcatctttcctctcctcctctttcctctcctcctcccctcccaag
aagcgcagcatcagtgcccccatctctatccccctgtccctctcctccccaagtgacgtc
gactgccgtcttgttctcgatgaccagactattgagaacgccatatctctcagtctggct
aagcgggcactgagaaacgccaccacccccgatgaaaacacagagggaaacagtccgtcc
actcaagaccaagccctctcctcccgagaggaaggaggcggaagaggaagaggcggaaga
gaagaggactgcatccagcgcctgagcgacatgagtatttccaccgactccactgactca
gtagacttctcccagggcttcttccccccaatcgctgaacccagcccacccaccaccaat
aacctggtgctgcccctcacccacccctacagcagcatggaggaagacgatgatgaagac
gaagcagactttggcgtgagtgtggagaacgaccaagaccaggacctgaccatcacccct
cccgggctgcgcaccaaacgacgagccagtgtcggagccatggtcatccagcaggccctc
aggggccacttccgtaagatgagtggggtgttcagctctctcctaacccctgagaaacgg
gccatacggagagtcctggagctgtccagggataagggctcgtactttggatgcctagtg
caggactacttgagcttcttgcaggagggagggggctgccaggcctggcagtgccacgcc
tcagggctggagctgctgcagacgctacgccagttcatcacccagatgaagagctacctg
cggcagagctctgagctggagccccccatcgagtcactcatcccagaggaccaaattgac
tatgtcctagaaaaagccatgcataagatagtcctgaagcccctgaaaggtgtggtgggg
gtggccctccaggagttccaggtccgcagcggcgcgtggcaggagctcaaggagaacctc
tcattggccaaggcccggcagcctcatgagatgggcgtggccaacgccttccctccggat
ccagttaacatagagaaaatccggcacaagttccacaccatgtgtaaactctattcacct
gagaagaaggtgaccatgctgctgcgcgtatgtaaactcatctataccatcatggagcac
aagtccggttgtctgtatggagcagatgacttcctgcccatgctgacctatgtgttggcc
cagtgtgacatgcctcaactagacaacgagatcctctacatgatggaggttctggatcct
tctctgctgcatggagaaggtggatactacctgaccagtgcatatggagccatgtccctc
attaggaacttccaagaggagcaagcagctcgtgtactcagctctgaaacacgcaacaca
ctccgccagtggcactgtcgccgcaccacccagcacagtgcgccctccgtcaatgacttc
cagaactacctgcgggtagcgctccaggacagcggttgcactgccaaaactctgcaagtg
caaccctatgccacgactgaggaaatctgccagatctgcgcctacaagtttaaagttccc
gaccctgagaattacgccctaatcctgctcactgagggctcatgccagcagctagctctc
gacacacacccccagaagatcaaagctgagctccacagtcaaccccaggccgcacctttt
cacttcgtcttctgtcgggtggctaacctcaatgacctggccgcgacctcgtttgaaccc
cagtccaacctcaatgacatcacacttaccaaagaatctgagcccaaccttaatggtgtg
gccttgaccccttctgacccccagcccaacctcaacctgggtctcagtcccagtctcagc
ttcagtctaccccccaaccagcacaatggtaactccatatccatctga
DBGET
integrated database retrieval system
