Oncorhynchus tshawytscha (Chinook salmon): 112254403
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Entry
112254403 CDS
T05605
Name
(RefSeq) protein transport protein Sec61 subunit alpha
KO
K10956
protein transport protein SEC61 subunit alpha
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03060
Protein export
otw04141
Protein processing in endoplasmic reticulum
otw04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
112254403
04141 Protein processing in endoplasmic reticulum
112254403
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
112254403
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112254403
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
otw02044
]
112254403
Membrane trafficking [BR:
otw04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
SEC61 complex
112254403
Secretion system [BR:
otw02044
]
Sec (secretion) system
Eukaryotic Sec-SRP protein
112254403
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecY
Plug_translocon
Motif
Other DBs
NCBI-GeneID:
112254403
NCBI-ProteinID:
XP_024282737
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Position
LG07:33613196..33624735
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AA seq
476 aa
AA seq
DB search
MGIKFLEVIKPFCAVLPEIQKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSAD
PFYWMRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPKDRALFNGAQKLFG
MIITIGQAIVYVMTGMYGDPSEMGAGICLLIIIQLFVAGLIVLLLDELLQKGYGLGSGIS
LFIATNICETIVWKAFSPTTVNTGRGTEFEGAVIALFHLLATRTDKVRALREAFYRQNLP
NLLNLIATVFVFAVVIYFQGFRVDLPIKSARYRGQYNTYPIKLFYTSNIPIILQSALVSN
LYVISQMLSTRFSGNFLVNLLGTWSDTSTGGPARAYPVGGLCYFLSPPESFGSVLDDPIH
AAIYIVFMLGSCAFFSKTWIEVSGSSAKDVAKQLKEQQMVMRGHRETSMVHELNRYIPTA
AAFGGLCIGGLSVMADFLGAIGSGTGILLAVTIIYQYFEIFVKEQSEMGSMGALLF
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgggcatcaaatttttggaagtcataaagccgttttgtgcggtcttacccgagattcag
aaaccagagagaaagattcagttcagagaaaaagtactatggactgccatcactctcttc
atcttcctggtgtgctgccagattcccctctttggcatcatgtcctcagactctgcagat
cccttctactggatgagagtaatcctggcttccaacagaggtactctgatggagctgggt
atctcacccattgttacctctggtctcatcatgcagctgctggctggagccaagatcatt
gaggttggagacacccccaaggacagagcactcttcaatggagcacagaaattgtttggc
atgatcatcaccattgggcaggccattgtttacgtgatgactgggatgtacggagacccc
tcagagatgggtgctgggatctgcctgctcatcatcattcagctgtttgtggcaggtctg
attgtgctgctgctggatgagctgctgcagaagggctatggtttaggctctggtatctcc
ctgttcattgccaccaacatctgtgagaccatcgtctggaaggccttcagtcccactact
gtcaacactgggagaggaacggagtttgaaggtgccgtcattgcactgttccacctgttg
gccacccgcacagacaaggtgcgcgccctgagagaggccttctaccgccagaacctgcct
aacctcttgaacctcatcgccacagtcttcgtctttgctgtcgtcatatacttccagggc
ttcagggtggacttgcccatcaagtctgcccgttaccgtggtcagtacaacacctatccc
atcaagctcttctacacctccaacattcccatcatcctccaatctgcccttgtgtccaac
ctgtacgtcatctctcagatgctctccacacgattcagtggcaactttctggttaacctg
ctgggcacctggtctgatacttccactggaggaccagctcgtgcctacccagttggaggt
ctctgctacttcctctctcccccggagtcctttggttctgttttggatgaccccatccat
gctgcaatctacatcgtcttcatgctgggctcctgtgccttcttctccaagacatggatc
gaggtttcaggatcctcggccaaagatgtggctaagcagctgaaggaacagcagatggtg
atgaggggacacagagagacctcaatggtgcacgagctcaaccggtacatccccacggct
gcagctttcggtggcctatgcataggtgggctgtccgtcatggcggactttctgggcgcc
atcggttcgggtactggaattctattggccgtgaccatcatctaccagtactttgagatc
ttcgtcaaggagcagagtgaaatgggcagcatgggagcgctgctattctag
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