Oncorhynchus tshawytscha (Chinook salmon): 112254405
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Entry
112254405 CDS
T05605
Name
(RefSeq) elongation factor 1-alpha, somatic form isoform X2
KO
K03231
elongation factor 1-alpha
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
112254405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
otw03019
]
112254405
03016 Transfer RNA biogenesis [BR:
otw03016
]
112254405
03012 Translation factors [BR:
otw03012
]
112254405
04131 Membrane trafficking [BR:
otw04131
]
112254405
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
otw04147
]
112254405
Messenger RNA biogenesis [BR:
otw03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
112254405
Transfer RNA biogenesis [BR:
otw03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
112254405
Translation factors [BR:
otw03012
]
Eukaryotic type
Elongation factors
112254405
Membrane trafficking [BR:
otw04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
112254405
Exosome [BR:
otw04147
]
Exosomal proteins
Proteins found in most exosomes
112254405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
GTP_EFTU_D4
MMR_HSR1
Gtr1_RagA
Motif
Other DBs
NCBI-GeneID:
112254405
NCBI-ProteinID:
XP_024282742
LinkDB
All DBs
Position
LG01:complement(59411998..59446331)
Genome browser
AA seq
462 aa
AA seq
DB search
MGKEKLHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVL
DKLKAERERGITIDISLWKFETSRYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGV
GEFEAGISKNGQTREHALLAYTLGVKQLIVGINKMDSTEPNYSQKRYEEIVKEVSTYIKK
IGYSPDMVAFVPISGWNGDNMLEASPNMTWFKGWKITRKDGSSSGTTLLEALDAIQPPSR
PTDKPLRLPLQDVYKIGGIGTVPVGRVETGMIKPGMVVTFAPVNVTTEVKSVEMHHEALT
EAMPGDNVGFNVKNVSVKDIRRGNVAGDSKNDPPMEAAVFTAQVIILNHPGQISAGYAPV
LDCHTAHIACKFAELKEKIDRRSGKKLEDNPKALKSGDAAIVDMVPGKPMCVESFSEYPP
LGRFAVRDMRQTVAVGVIKGVEKKAPSTGKVTKSAQKAQKTK
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaggaaaagcttcacatcaacattgtggtgatcggccacgtggactctggaaag
tccaccaccactggccacctgatctacaagtgtggtggcattgacaagaggaccatcgag
aagtttgagaaggaggctgctgagatggggaagggctcctttaagtacgcctgggtgctg
gacaagctgaaggcagagagggagcgtggcattaccattgacatctcactgtggaagttt
gagaccagcaggtactacgtcaccattatcgatgctcccggacacagggacttcatcaag
aacatgattactggaacctcccaggcggactgtgcagtgctgatcgtggcggctggcgtg
ggggaattcgaggcgggcatctcaaagaacgggcagacccgcgagcacgccctcctagcc
tacaccctgggggtcaagcagctgatcgtgggaatcaataagatggactccactgagccc
aactacagccagaagcgctatgaggagattgtgaaggaagtcagcacctacatcaagaag
attggctacagcccggatatggtagcctttgttcctatctctggctggaatggagacaac
atgctagaggccagtcctaatatgacctggtttaagggatggaagatcacccggaaggat
ggcagttcgtccgggaccaccctgctggaagctctggatgccatccagcccccgtcccgc
cccaccgacaagcccctccgcctgccccttcaggatgtctacaagattggaggaattggc
acagtgcccgtggggcgtgtggagacgggtatgatcaagccaggcatggtggtgaccttt
gcccctgttaacgtgacaactgaagtgaagtctgtggagatgcaccacgaggctctgacc
gaagcaatgcccggagacaacgtgggcttcaacgtcaagaacgtgtccgtcaaagatatt
cgccgtggcaacgtggccggagacagcaagaacgaccccccaatggaggcagccgtcttc
actgctcaggtgatcatcctgaaccacccaggtcagatcagtgctgggtatgccccggtg
ctggactgccacacagcccacatcgcttgcaagtttgctgagctcaaggagaagatagac
cgtcgctcaggcaagaaactggaggacaaccccaaggccctgaagtctggggatgccgcc
attgtggatatggtcccggggaagcccatgtgtgtggagagcttctctgagtaccctcca
ctgggtcgttttgcagtgcgtgacatgcgccagacagtggcagtcggggtgataaagggt
gtggagaagaaagctccctccactggcaaggtcaccaagtctgcccagaaggcccagaag
accaaatga
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