Oncorhynchus tshawytscha (Chinook salmon): 112254414
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Entry
112254414 CDS
T05605
Name
(RefSeq) ras-related protein rab7
KO
K07897
Ras-related protein Rab-7A
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04137
Mitophagy - animal
otw04140
Autophagy - animal
otw04144
Endocytosis
otw04145
Phagosome
otw04148
Efferocytosis
otw05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
112254414
04145 Phagosome
112254414
04140 Autophagy - animal
112254414
04137 Mitophagy - animal
112254414
04148 Efferocytosis
112254414
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
112254414
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112254414
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
otw04147
]
112254414
04031 GTP-binding proteins [BR:
otw04031
]
112254414
Membrane trafficking [BR:
otw04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab GTPases
112254414
Exosome [BR:
otw04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
112254414
Exosomal proteins of other body fluids (saliva and urine)
112254414
Exosomal proteins of colorectal cancer cells
112254414
Exosomal proteins of bladder cancer cells
112254414
GTP-binding proteins [BR:
otw04031
]
Small (monomeric) G-proteins
Rab Family
Rab7/9 [OT]
112254414
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
MMR_HSR1
GTP_EFTU
Gtr1_RagA
RsgA_GTPase
ATP_bind_1
cobW
PduV-EutP
nSTAND3
Septin
AAA_16
NTPase_1
AAA_7
AAA_22
AAA_24
G-alpha
AAA_5
ATPase_2
NACHT
NB-ARC
AAA_14
SRPRB
ABC_tran
ATP-synt_ab
Motif
Other DBs
NCBI-GeneID:
112254414
NCBI-ProteinID:
XP_024282754
UniProt:
A0AAZ3S9P7
LinkDB
All DBs
Position
LG07:complement(33779586..33786462)
Genome browser
AA seq
207 aa
AA seq
DB search
MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ
IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPF
VVLGNKIDLENRQVTTKRAQAWCQSKNNIPYFETSAKEAINVEQAFQTIARNALKQETEV
ELYNEFPEPIKLDRNERSKPSAEACSC
NT seq
624 nt
NT seq
+upstream
nt +downstream
nt
atgacgtctaggaagaaagtactacttaaagtcatcatcctgggagactctggagttggg
aagacctctctgatgaaccagtatgtgaataagaagttcagtaaccagtacaaagccaca
attggagctgatttcctgacgaaagaagtgatggtggacgacaggcttgtcaccatgcag
atctgggacacagcggggcaggagaggttccagtctctgggcgtggcattttaccgcggg
gcagactgttgcgtgctggtgtttgacgtgaccgcccccaacaccttcaagaccctagac
agctggagggacgagttcctcatacaggccagcccccgagaccccgagaacttccccttc
gtggtgctaggcaacaagattgacctggagaacagacaggtgacgactaaacgagcacag
gcctggtgtcagagcaagaacaacatcccctacttcgagaccagcgcaaaggaggccatc
aacgttgaacaggctttccagactattgcacgcaatgctcttaaacaggagacagaggtg
gagttgtacaatgagttccctgaaccgataaagctggacaggaacgaacgttccaagcca
tcagcggaggcctgcagctgctga
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