Oncorhynchus tshawytscha (Chinook salmon): 112254419
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Entry
112254419 CDS
T05605
Name
(RefSeq) scm-like with four MBT domains protein 1 isoform X1
KO
K26269
scm-like with four MBT domains protein
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
112254419
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
otw03036
]
112254419
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
PRC1.4 specific proteins
112254419
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Gene cluster
GFIT
Motif
Pfam:
MBT
SLED
SAM_1
SAM_2
SAM_PNT
SAM_Ste50p
Motif
Other DBs
NCBI-GeneID:
112254419
NCBI-ProteinID:
XP_024282762
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All DBs
Position
LG07:complement(33961222..33978352)
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AA seq
870 aa
AA seq
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MSHESLESDEDSSQHVSDFNWDEYLEENGTLSVPHHAFKHVDQGLQTGLTPGMKLEVCVR
SEPDQPYWVATIITTCGQLLLLRYEGYHDDRRADFWCDIMTADLHPLGWSRQQGKPMRPS
EGVREKQPDWEGILEKALAEKCSAPANLLEVRRKDPVDLMSPGCSVELQDSFDPGVVWGA
EVEENVGGRLRLRLAGAEGLPETHSTLWLYYLHPRLHPPGWAKEHGCTLRPPLALVALHT
EEKWEEVRQRMIDQPHDEALSEEFYKDRPVIAAHCFTEGMKLEAVDPASPFCISPATVTK
VFSDQYFLVKMDNLCGDDLVSEGSGKSFLCHRDSPGIFPAQWSLKNGLPLSPPPGYQGQD
FDWADYLKQSEAEAAPQHCFPTSLCLSQEQSDHSFKEAMKLEAVNPLSPEHIHVASVIKV
KGQHIWLGLEGLKQAMPELIAHVDSLDIFPVSWCETNGYPLLYPIKPEVEKQRRIAVVQP
EKHRAPPKSATPDALKQQMTSQSETGQGNGKYCCPKIYFNHRCFSGPYLNKGRIAELPQC
VGPGNCVLVLKEVLTLLINSAYKPSRVLRELQLDQENRWHGHGETLKAKYKGKSYRATVD
IVRTADCVAEFCRKTCMKLECCPNLFGPRMVLERCSENCSVLTKTKYTYYYGKKKSRRVG
RPPGGHSNLEGGVKRRGRRRKRRKQLFVHKKRRSSASLDNTPAGSPQGSGEEEDLDDEDS
LSDDTGSELQDDQDDSEYSIGKSQPPTPSPSPPATPRPTRKRRKPHSPSYSDDENHPPSP
KRSRSEAPQKLCLDTSPLEWSVTDVVRFIRTTDCAPLARIFLDQEIDGQALLLLNLPTVQ
ECMDLKLGPAIKLCHHIERVKLAFYQQFAT
NT seq
2613 nt
NT seq
+upstream
nt +downstream
nt
atgagtcacgagtcactggaatctgatgaggactcgagtcagcacgtgtctgactttaac
tgggatgaatatctggaggaaaacgggaccttgtctgtgccccaccatgccttcaaacac
gtggaccagggcttgcagacagggctgactccaggtatgaagctggaggtgtgtgtgcgt
tcagagcctgaccaaccctactgggtggccaccatcatcaccacctgtggccagctgctc
ctcctgcgctacgagggttaccacgatgaccgccgcgctgacttctggtgtgacatcatg
acggcggacctccaccccctgggctggagccggcagcagggcaagcccatgagaccctcc
gagggtgtgagagagaagcagccagactgggagggcatcctggagaaagccctggctgag
aagtgcagtgcacctgccaacctgctggaagtgcgtcgtaaggacccagtggacctgatg
tctccaggctgcagtgtggagctgcaggacagttttgaccctggggtggtgtggggcgct
gaggtggaggagaatgtgggtggcaggctgagactacgcctagcaggcgcagaggggctc
cctgaaacacactccaccctctggctctactacctgcacccccgccttcacccacctggc
tgggccaaggagcatggctgcaccctcaggcctcctttagccctggtcgccctgcacaca
gaagagaagtgggaggaggtcagacagaggatgattgatcagcctcatgatgaagccctc
tctgaggagttctataaggaccggcctgtcatcgctgcccactgcttcactgaggggatg
aaactggaggctgttgaccctgcatccccattctgcatcagtcctgccaccgttaccaag
gtgttcagtgaccagtacttcctggtaaagatggacaatctctgtggtgatgatttggtg
tcagaaggcagtgggaagtccttcctgtgtcacagggacagtcctgggatctttcccgcc
cagtggagcctgaagaacggtctcccgctcagcccccctccagggtaccaggggcaggac
tttgactgggcagactacctgaaacagagtgaggccgaggcagcaccacaacactgtttc
cccacatctctctgtctgtctcaggaacagtccgatcacagctttaaagaggccatgaaa
ctggaagcggtcaacccactctcacctgagcacattcatgtggcatcagtaatcaaggtt
aaagggcaacatatctggcttggcctggaagggctgaaacaggctatgccagagcttata
gctcatgtggactcattggacatctttcctgtcagctggtgtgagaccaacggttaccct
ttgctgtaccccatcaagcccgaagttgagaagcagaggaggattgctgtggtgcagcct
gagaaacaccgagctccacccaaatccgcaacacctgatgcactcaagcagcagatgacc
agccaatcagagactggacaggggaacgggaagtactgctgtcctaagatctacttcaac
caccgctgcttttctggcccctacctgaacaagggccgcatcgctgagctgccccagtgt
gtcggccctggcaactgtgtcctggtgctcaaagaggtgttgactctgctgatcaactct
gcctataagcccagccgggtgctcagggagctgcagctggaccaggagaaccgctggcac
ggccatggagagacgctcaaagccaagtacaagggaaagagttaccgggctacggtggat
atagtgcgtacagcagactgcgtggctgagttttgtagaaagacctgcatgaagctggag
tgttgcccaaacctgtttggacctcgcatggttctggagcgctgctcagagaactgttct
gttctcaccaagaccaaatacacttattactatggtaagaagaagagtaggcgagtgggc
cgcccaccaggggggcactctaacctggaagggggggtgaagaggagaggtaggaggagg
aagaggaggaagcaactcttcgtccataagaagagacgctcctcagcctcactggacaac
acacctgccggttcaccacaggggagtggagaggaggaggatctggatgatgaggactct
ctgagtgacgatactggctctgaactccaggatgatcaggacgattcagaatattccatt
gggaagtcacagccacccaccccgtccccttctcctcctgcaacgccccggccaacccga
aagcgcaggaaacctcactccccatcctactctgatgatgagaaccacccaccttcacca
aagcgctcaagaagtgaggctccccagaagctgtgtttggacaccagtcccctagagtgg
agtgtgactgatgtggtgcgtttcatcaggaccaccgactgtgctcccctggctcgcatt
ttcctggatcaggagattgatggacaggctctgctccttctcaacctgcccacggtgcag
gagtgtatggacctgaaactgggaccagccataaagctgtgtcaccatatcgaaagggtc
aaactggcattctaccagcaatttgctacgtag
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