Oncorhynchus tshawytscha (Chinook salmon): 112254430
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Entry
112254430 CDS
T05605
Name
(RefSeq) succinate--CoA ligase [GDP-forming] subunit beta, mitochondrial
KO
K01900
succinyl-CoA synthetase beta subunit [EC:
6.2.1.4
6.2.1.5
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw00020
Citrate cycle (TCA cycle)
otw00640
Propanoate metabolism
otw01100
Metabolic pathways
otw01200
Carbon metabolism
Module
otw_M00009
Citrate cycle (TCA cycle, Krebs cycle)
otw_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
112254430
00640 Propanoate metabolism
112254430
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
otw04147
]
112254430
Enzymes [BR:
otw01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.4 succinate---CoA ligase (GDP-forming)
112254430
6.2.1.5 succinate---CoA ligase (ADP-forming)
112254430
Exosome [BR:
otw04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
112254430
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-grasp_2
Ligase_CoA
Citrate_synth_N
ATP-grasp_5
GARS_A
Succ_CoA_lig
Motif
Other DBs
NCBI-GeneID:
112254430
NCBI-ProteinID:
XP_024282779
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All DBs
Position
LG07:34720918..34848277
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AA seq
443 aa
AA seq
DB search
MVLHSDLFRVNMAASIVSQTVARGLRRASAKHLFLDKFKCAQVSSRRWLNLQEYQSKKLM
QESGVTVQRFYVADNAPDALQAAKRLGAKEIVLKAQILAGGRGKGVFDSGLKGGVHLTKD
PSVVGELANRMLGYSLTTKQTPKEGVKVKTVMVAEALDITRETYFAILMDRACNGPVMVG
SPQGGMDIEEVADKTPELIFKEVIDIFEGVRDDQAVRMAANLGFKGPLERQAADQIKRLY
DLFLKVDATQVEVNPLGETPEGQVVCFDAKINFDDNAEFRQKAVFALDDMSESDPTETEA
AKWDLKYIGLDGNIACFVNGAGLAMATCDIIDLHGGKPANFLDLGGGVKEKQVYEAFKLL
TADPKVEAILVNIFGGIVNCAIIANGITKACRELELKVPLVVRLEGTNVQEAKRILSESG
LPIVAANDLEDAAKKAVAAIAKK
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atggtccttcacagtgatcttttccgcgtcaacatggcggcatccatcgtatcccagact
gtagcgagaggactacgtagagcaagcgccaagcacttgttccttgacaaattcaagtgt
gcacaggtgagttccaggcgatggctgaacctgcaggagtatcagagcaagaagctgatg
caggagagtggggttacagtccagcgcttctacgtggctgacaatgcccccgacgccctg
caggctgccaagagactcggtgccaaggagatagtcctgaaggcccagattctggctggg
ggacgagggaagggcgtgttcgacagtggccttaaaggtggagtgcacttaactaaagac
ccctcggtggtgggtgagctggccaataggatgctaggttatagcctgaccaccaagcag
actccaaaggagggagtgaaagtaaaaacggtgatggtggctgaagccctggacatcacc
agggaaacctactttgccatcctgatggaccgggcctgcaacgggcctgtcatggtgggc
agtcctcagggtgggatggacatagaggaggtggccgacaaaaccccagagctcatattt
aaggaagtcatagatatattcgagggggtgcgagacgaccaggcggtccgcatggcagct
aatttgggtttcaaaggacctctggagagacaggctgcagatcagattaagaggctctat
gatctgttcctgaaagtcgacgccactcaagttgaagtcaatcctctcggagagactccc
gaaggacaagtggtgtgctttgatgccaagatcaattttgacgataacgcagagttccgt
cagaaagccgtctttgccctggacgacatgtcagagagcgatcccaccgagacggaggca
gccaaatgggacctcaagtacatcggcttggatggaaacatcgcctgctttgtgaatggg
gctggtctggctatggccacgtgtgatatcatcgacctccatggagggaagccggccaac
ttcctggacctaggaggaggggtgaaggagaagcaggtgtacgaggcattcaaactgctc
actgctgacccgaaggtggaagccatcctggtgaacatcttcgggggcatcgtcaactgt
gccatcattgccaacggtatcaccaaggcttgccgtgagctggagctcaaagttcccctg
gttgtcaggctggaagggaccaatgtgcaggaggccaagaggatcctgtcagagagtgga
ctgcccattgtagccgccaacgacctggaagacgctgccaagaaagctgtggctgccatt
gccaagaagtag
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