Oncorhynchus tshawytscha (Chinook salmon): 112254435
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Entry
112254435 CDS
T05605
Symbol
magi1b
Name
(RefSeq) membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1b isoform X1
KO
K05631
atrophin-1 interacting protein 3 (BAI1-associated protein 1)
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
112254435 (magi1b)
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Gene cluster
GFIT
Motif
Pfam:
PDZ
MAGI_u5
PDZ_6
MAGI_u1
PDZ_2
WW
Guanylate_kin
DUF6288
PDZ_Tricorn
Motif
Other DBs
NCBI-GeneID:
112254435
NCBI-ProteinID:
XP_042180272
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All DBs
Position
LG07:35254907..35450219
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AA seq
1413 aa
AA seq
DB search
MSKVIQKKNHWTTKVNECAVLKDARGDLNVQLLGGAENGEFAYIGQVNDGIVVYKNGKLT
EGALILEVENLSISGLPLYDVQTVIKNCSGPIRLRTVRQGNKLNKDLKHYLSQRFQKSSP
DHELQQTIRDNLYRHAVPCTTRPPRPGEVPGVDYNFLPVEDFLALEQRGTLLEIGTYEGN
YYGTPKPPSQPASGKVITSDALQDSLPGSQHSTPRRTKSYNEMQNAGIVPVDLEEDEELP
EMNSSLTGDSSEPDEHPSVRPYALRENAPSYGVINASSSTTDGSQQTHTHLSHPPTEEDP
LGPLADNWEMAYTENGEVYFIDHNTKTTSWIDPRCLNKPPKPLEECEDDEGVHTEEMDSE
LELPTGWEKIEDPVYGLYYVDHINRKTQYENPIQEAKRRKQLEQQQPPEGERYIREWIED
ATMAGAPLASYTANHQETYRDTQARPPLPPLIGPKRGKHFFTRNPAELKGTFINTKLRKS
HRGFGFTVVGGDEPDEFLQIKSLVLDGPAAIDGKMETGDVIVSVNDTCVLGYTHAQVVKV
FQSIQIGSIVNLELCRGYPLPFDPDDPNTSLVTSVAIVDKEPIIINGQESYDSPSSHGSQ
TGGPVNGMRESGPHSPSSAEVASNGSHSYPSDSVTLASSIATQPELITVHMEKGDKGFGF
TIADSPAGGGQRVKQIVDYPRCRGLKEGDIIVEVNKRNVQSMSHNQVVDLLSKCPKGSEV
TMLVQRGGGVAPAKKSPKLQLARKDSQNSSVHSVSSHRSTHTDSPVHPSLATPFIESAAP
PPPSQPLPGLPPQDPQADGTIQRKPDPFKIWAQSRSMYESRLPDFQEQDIFLWRKDTGYG
FRILGGNEPGEPIYIGHIVKYGAADEDGRLRSGDELICVDGTAVVGKSHQLVVQLMQQAA
KQGHVNLTVRRKTGYGGSKGEGEVPPSPASSHHSSTQAPSLTEEKRTPQGSQNSLNTVSS
GSGSTSGIGSGGGGGGSGSTVVNTALQPYDVEIRRGENEGFGFVIVSSVSRPESGTTFAG
NACVAMPHKIGRIIEGSPADRCGKLKVGDRILAVNGCSITNKSHSDIVNLIKEAGNTVTL
RIIPGDESSNASLLTNAEKIATITTTHTAQQQATPDPRNNTKPKQESSFEFKSPQAPPPP
TTQPPAQDAGFYSVDLERENKGFGFSLRGGHEYNMDLYVLRLAEDGAAVRNGKMKVGDEI
LEINGESTKGMKHARAIELIKNGGRRARLVLKRGDGSVPEYDPSIDGAGTAAGVQNASEV
STLPYNNAPSDTNAPVPHKPSRSKNKKGHHHSKHRSPEKKSQGGASGETRASKQSKKKVD
KSQRSGGDTHGTHHRGHHSPNKGRSRARSAENTLDTRHSQGHHNTHRSPYRSTHRNRSPY
GHRSPYRSPTAHTTTPPPATAVPNPQTPTGSPP
NT seq
4242 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaagtgatccaaaagaagaatcactggaccactaaagttaacgagtgcgctgtc
ctcaaagacgctcgcggtgacttaaatgtacaattgctcggtggtgcggagaacggagag
ttcgcctacatcggacaagttaacgatggtatcgtggtttacaaaaatggaaaattaaca
gagggggcgttgatattggaagtagagaacctctcgatctctgggttgcccctgtatgat
gtacagacagtgataaagaattgcagtggtcccatcagattgagaacggtcagacaagga
aacaagctgaataaggacctgaagcactatctgagccagcgcttccagaagtcctctccg
gaccacgagctgcagcagaccatccgagacaacctctaccgccacgccgtgccttgtaca
acccgtcccccgcgtcccggagaggtccctggggtcgattacaacttcctgccggtggag
gacttcctggcgctggagcagaggggaacccttctggaaataggaacatatgaaggtaac
tattatggaacacccaagccaccgagccagcccgctagtgggaaagtgattactagtgat
gctttgcaagacagcctcccgggctcccagcactccactccccgacgcaccaagtcctac
aatgagatgcaaaatgctggaatagtgcctgtagacctggaggaggacgaggaactcccg
gagatgaacagtagtttaacaggagactcaagtgaacccgacgagcacccctccgtgcgc
ccctacgccctacgtgagaacgccccatcctacggtgtgatcaacgcgtcgtcatccacc
acggacggctctcagcagacacacacacacctcagccatcctcccacagaggaggacccc
ctgggacctctagctgataactgggagatggcctacaccgagaacggagaggtctacttt
atagaccacaacacaaagaccacatcctggattgacccccggtgcctcaacaaacctcct
aaacccctggaagaatgtgaagacgacgaaggggtacacacagaagagatggacagtgag
ctagagctgccaacaggctgggagaaaatagaggacccagtctacgggctttactatgtg
gatcacatcaacaggaagacccagtatgagaaccctatacaggaagctaagcgacggaag
cagctcgagcaacagcagccaccagaaggtgagcgctacatccgagaatggatagaggat
gctaccatggctggtgcccccctggccagctataccgccaaccaccaggagacctacagg
gacacccaagccagacccccactgccgcccctcatcgggccaaaacgagggaagcacttc
ttcacgcggaacccggcggagctgaagggaaccttcatcaacaccaaactaaggaagagc
caccgagggttcggcttcaccgtcgtcgggggcgatgagcctgatgagttcctacagatc
aagagtctggttctggacggacctgctgccatcgacggcaagatggagacaggtgacgtg
atcgtgagtgtcaatgacacttgcgtgctgggctacacccacgctcaggtggtgaaggtc
ttccagtccatccagatcggctccatcgtcaacctggagctgtgccgcggctaccccctg
ccctttgacccagacgaccccaacactagcctggtgacctccgtggccatcgtggacaag
gagcctatcatcatcaacggccaggagagctatgactctccgtccagccacggcagccag
accggaggccccgttaatgggatgagagagtcaggaccccacagcccctcctctgccgag
gtggcgtctaacggctcgcacagttaccccagcgactctgtgacgctggcgtcgtccata
gcgacgcagccagagctgatcacagttcacatggagaagggagacaaaggctttgggttc
accatcgcagacagccctgcagggggaggacagagggtcaaacagatcgtagactacccc
cgctgcaggggcctgaaggagggggacattattgtggaggtgaacaagaggaacgtccag
agcatgagccacaaccaggtggtggacctgctcagcaagtgccccaaaggaagtgaggtc
accatgctggtgcagagaggtggaggggtggctcctgcaaagaagagcccaaagctgcag
ttagcgaggaaggacagtcagaacagttctgtgcacagtgtgtccagccaccggagtacc
catactgactcccctgtgcacccatccctggccaccccattcatcgagagtgccgccccc
ccacccccctcccagcccctgcccggcctgcctccccaggaccctcaggcagacggaacc
atccagaggaaaccggaccccttcaagatctgggcccagtccaggagcatgtatgaaagt
aggctgcctgacttccaggagcaggacatcttcctgtggagaaaggacacgggctacggg
ttccggatcttgggagggaacgagccaggagagccgatctacatagggcacatagtgaag
tacggggcggcggatgaggacgggcgcctgcgttcgggggatgagctcatctgtgtggac
ggcacggcggtggtggggaagtctcaccagctggtggtacagctgatgcagcaggctgcc
aagcagggccacgtcaacctcaccgtgcgacggaagaccggctatggcgggtctaaaggg
gagggcgaggtgcccccgtccccagcctcgtcccaccacagcagcacacaggccccctcc
ctgacagaggagaagcggaccccccagggcagccagaactccctcaacacggtcagctcc
ggcagtggctccaccagtggcattggcagcggggggggcggtgggggctcgggtagcacc
gtggtcaacactgccctgcagccctacgatgtggagatccgccgcggagagaacgagggc
ttcggatttgtgattgtctcttctgtgtcccgacccgagtctggcaccacctttgctgga
aatgcatgtgtggccatgccccacaaaataggtcgtattattgaggggagccctgcggac
cgctgtgggaagctgaaggtgggagaccgtatcctggccgtcaacggctgctccatcacc
aacaagtcccactcggacatcgtcaacctgatcaaggaggccgggaacaccgtcacgctg
cggatcattcctggagacgagtcctctaatgcatcactgctgaccaacgctgagaagatc
gccactataacaactactcacacagcccaacaacaggctacacctgaccccagaaacaac
actaaaccaaaacaggagtcctcttttgagttcaaatccccccaggcccctcctccccca
acaacacaacctccagcccaggatgctggcttctactcggtggacctggagagagagaac
aaaggttttgggttcagcctgagaggaggtcatgagtacaacatggacctgtatgtgctg
agattagccgaggatggagcagctgtacgcaatggcaagatgaaggtgggagatgagatc
ttggagataaatggtgagagcaccaagggcatgaagcacgcccgcgccatcgaactgatt
aaaaacggcggtcgccgcgcccgcctagttctcaaacggggcgacggctcggtgcctgaa
tatgaccccagcatcgacggtgccggcacagccgcaggggtacaaaacgcttcggaagtg
agcaccctgccctacaacaacgcaccatcggacacgaacgcaccagtccctcacaaacca
tcacggagcaagaacaagaagggccaccaccattccaaacaccgatccccggaaaagaag
agccagggaggggcgtctggggagacaagggcctccaagcagtccaagaaaaaagttgac
aagagccagaggtctggcggggatacgcacggcactcaccaccgaggacaccactccccg
aataagggccgtagccgggcccgcagcgcagagaacaccctagacactagacacagccaa
gggcaccacaacacccaccgctctccctacaggtccactcaccgcaatcggtccccctat
ggccaccggtccccctaccgctcccccaccgctcacaccaccactcccccacccgctacc
gccgtacccaatcctcagacccctaccggcagccctccctag
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