Oncorhynchus tshawytscha (Chinook salmon): 112254470
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Entry
112254470 CDS
T05605
Name
(RefSeq) eukaryotic translation initiation factor 4 gamma 3 isoform X1
KO
K03260
translation initiation factor 4G
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
otw03019
]
112254470
03012 Translation factors [BR:
otw03012
]
112254470
Messenger RNA biogenesis [BR:
otw03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
112254470
mRNA cycle factors
Stress granule specific factors
112254470
Translation factors [BR:
otw03012
]
Eukaryotic type
Initiation factors
eIF-4
112254470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G
MA3
W2
PP_kinase
Motif
Other DBs
NCBI-GeneID:
112254470
NCBI-ProteinID:
XP_024282871
LinkDB
All DBs
Position
LG07:complement(38331677..38410256)
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AA seq
1813 aa
AA seq
DB search
MSLPTKIVPKPATVAVSGPGTVPSPSSQLRATLTSVSLPPGAPGAPQSNAVPPPQIFLNM
TRPRIPRVQPSLDDRIFPTQPGVTAVYSVPRHPGPPYTAHDITKGHPNLAGTPPGHAHSP
ALSQVSVPTASPYRYPKGWEAGGGSPYTTGQNAGSTPLVYSPQTQQMNAQPQSRPSSMPS
PSPSPPVIWNHQFATGPRPTHHQGGFRPIQFFQRAQMQTARPTIPTNTSSLRPGSQNPTA
AVYPPNQPTMMMMAPMPFPSPQAAQYYIPQYRHSTPYVGPPQPFSVQPPGSGTFYPGPGP
GEYPAQYAPGPQFYPGQQVYPPSPPIIVPTPQQPPPAKREKKPSSQIRIRDPNQGGRDIT
EEIMAGGTGSRNPTPPVGRPSSTPTPPQFLWPHPHYPHIFYLKSQQQQPSGSQTPEQGQG
QAHPAYSLEPPKQQQPTPGAADSKPGPVYDKPKLEPVIRKPSSPGIGQPEPSMAWREASA
PVTAPSPPVEKELPSPAPVMVAPIPAPRPVASPNPIEQPSAVEPATPTPSAAEPKTLPPT
THSQTPNTVEPLPEAPHTLAASPTLTPKALNGHADTGAELDTQAQEASPQDPSPSPPQPQ
ASTPAFREDCSEAVPSEVRAEIPPAVTGSIAPITVVPVTLTSKPAPAFPAPPPGLPPLVQ
ATAEASKPADTKDVPLKAGTEAFITPDNKPEPQLQALSRKSPTTGCQAAPDAPKTWKKPN
EESPVGDAQQRETEEELKPLEEAAGDQALPPTRSCSTSPPPSVAPSALEAEERPPAPEEN
GEAEPMRNGAGHTSETESSDSGATPGDNEGSTGPPPDLFQEDLETNGKRQYKRDFLLGFQ
FMAACTQKPDGLPQISDVVLDKINQNKLPTRAVESRVISRGPDFTPAFADFGRQMSGGRG
GAAVSHTHSQAHQMMNMGGGARRPPPRKIILNVSANEEVQLKKAENAWKPGMKRAGPSDD
PEVITTQELFRKVRSILNKLTPQMFNQLMKQVTDLTIDTEERLKGVIDLVFEKAIDEPGF
SVAYGNMCRCLTTLKVPMTDKPGTTVNFRKLLLNRCQKEFERDKVDDVVFERKQKELDSA
QSSDQERLRLELEEAKDKARRRSIGNIKFIGELFKLKMLTEAIMHDCVVKLLKNHDEESL
ECLCRLLTTIGKDLDFEKAKPRMDQYFNQMEKIVKERKTSSRIRFMLQDVIDLRLHNWVS
RRADQGPKTIEQIHKEAKIEEQEEQRKVHQQLLSKDTKRRPEQQQQQREQQREQQREQRV
QQRDETWNTVPMTKNSRTIDPTKIPKISKPQMDEKIQLGPRASLNWMKGSSGGAKASDSE
LSRSGGGGASLNRYSALQSTQSHQTTPPAQNLEYDTRRTLGSRSSAGRERSEKPLSPAPS
RPGSFVRGGSAKELLESPALSPEEPRRELESPSVSEDKTEPERSSAREPVKAEPVVAQSP
DRPALSEEEMERKSRAIIDEFLHINDYKEAVQCVDELDMSSQLHVFVRVGVESTLERSQI
TRDHMGKLLFQLVQQDILARSQFFKGFADTLELADDMAIDIPHIWLYLAELLSPVLRDRG
FSMRELFSELSKPLLPVGRAGILFSEILRILCKQMSHRKVGTLWRESGLSWSDFLPEGED
VQDFISEQKLQFTEADCSSHEAALATTALSLVVLNQQLERLLLEDMASDEQIFDWVEANL
DESQMSSSQFLRALMTAVCKAAVKDESASCRVDVAIIQRRLPVLLKYLNSDTERQLQALY
ALQALIVTLDQPPNLLRMFFDCLYDEDVISEDAFYKWETSKDPAEELGKGVALKSVTAFF
TWLREAEEESEDN
NT seq
5442 nt
NT seq
+upstream
nt +downstream
nt
atgagtttgccgacgaaaatagtcccaaaacccgccactgtcgcagtaagtggacctgga
actgtcccgtctccgtcgagccaactgcgggctaccctgacctccgtgtctttaccaccg
ggagccccaggtgctcctcagtcgaacgccgtgccgccacctcaaattttccttaatatg
acgcgtcccaggatccctcgggttcagccatccctggatgaccgcatcttccccacacag
cccggcgtcactgccgtctacagcgtaccgaggcaccctggtcctccctacacggctcat
gacatcacaaagggacaccctaacttggcgggcacaccgccagggcatgcccactcaccg
gcgctctctcaggtatcagtacccacagcttccccatatcgctaccctaagggctgggag
gcaggcggagggtctccatacaccactggacagaatgctggctccacacctctagtgtat
tctcctcagacccagcaaatgaatgcacagccacagagtcgcccgtcatccatgcccagc
cccagccccagcccccctgtcatatggaaccaccagtttgcgacgggccctcgaccaacc
caccatcagggaggattcaggcccatccagtttttccagagggctcagatgcagacagcg
cggccaaccatccccaccaacacttcatctctgcggcccggctctcagaaccccacagcg
gcggtatacccccccaaccagcccaccatgatgatgatggcccccatgcccttcccctcc
ccacaggctgcccagtactacatcccacagtatcgccacagtacgccctatgtggggccg
ccccagccgttttcagtgcagccgccggggtctggcaccttctatcctggccctgggccg
ggggagtaccctgctcagtatgctcccggacctcaattctatccaggacagcaggtgtac
cccccctcaccccccatcatagtgcctacaccgcagcaacctccaccagccaagcgtgag
aagaaaccatcctcccagatccgtatccgtgaccccaatcagggaggcagggacatcaca
gaggagatcatggcagggggcacagggagccggaatccaactccccctgtcggacgaccc
tcctccacccccacccctccgcagtttttatggccgcaccctcattatcctcacattttc
tacctcaaatcgcagcagcagcagccgagcggcagccagactccggagcagggccaaggc
caggcccaccctgcctacagcctggagccccccaaacagcagcagcccacgcctggggct
gcagacagcaaaccagggccagtatatgataagccaaaattggagccggttatccggaag
ccttcctctcccgggattggacaaccagaaccttctatggcgtggcgagaggccagtgca
cctgtaactgccccatctccccctgtagaaaaagagcttccctctcctgccccagtgatg
gtggcgcccatccctgcccctcgtcctgttgccagccccaaccccattgagcagccctct
gcagtggagcctgctactcccactccctctgcagctgagcccaagaccctgcctcccacg
actcattcccagaccccaaacacagtggagcctcttccagaagccccacacaccctggct
gcttcccccaccctaaccccaaaagctttgaatggccatgctgacactggggctgagctg
gacacccaggcacaagaggcctccccccaagatccctctccctccccaccccagccccag
gcttcaaccccggcattcagagaagactgtagtgaggctgtgcccagtgaggtgagagca
gagatcccccctgctgtcacaggctctatcgcacccatcactgtagtgccagtcactctg
acctccaaacctgcgcctgcttttccagcacctccccctggccttccaccactagtgcag
gccacagcggaggccagcaagcccgctgacactaaagacgtccctctcaaagcagggaca
gaggcattcataacaccagacaacaagcctgaaccacagctacaagccctctccagaaag
agtcccactacaggatgtcaggctgctcctgatgcaccaaagacctggaagaaaccaaat
gaagagagtcctgttggagatgcccaacagagggagactgaggaggagctcaagcctttg
gaagaggctgctggagaccaggccctgccacccaccaggagctgcagcacctctccccca
ccctcagtagctccctcagccctggaggcagaggagaggcccccagcccctgaggaaaac
ggggaggctgagcccatgaggaacggagcaggacacacctcggagactgagagcagtgac
agcggggccacccctggggacaatgagggctccacaggaccacccccagacctcttccag
gaagatctggagactaatgggaagcgtcaatacaaacgggacttcctgctgggctttcag
ttcatggctgcctgtacacagaagccagacgggctgcctcagatcagtgatgttgtgctg
gacaagataaaccaaaacaagctgccaacccgggcggtagaatccagggtgatctcccga
ggccctgacttcacaccggcctttgctgactttggcagacagatgagtggaggacgcggc
ggagctgcagtgagtcacactcactcccaggctcaccagatgatgaacatgggggggggt
gcccggcggcccccgcccaggaagattatcctgaacgtgtcagcgaatgaagaggtgcaa
ctgaagaaggctgagaatgcctggaaacccggcatgaagagggcggggccatcagatgac
cctgaggtcattacaacacaggagctcttccggaaggtgcgcagtatcctcaacaaactg
acgcctcagatgttcaaccagctgatgaagcaggtgaccgacctcaccatcgacacggag
gagcgcctcaagggcgtcatcgacctggtctttgagaaggccatcgacgagcccggcttc
tctgtggcctacgggaacatgtgtcgctgcctcaccacgctcaaagtgcccatgacggac
aaacccggaaccacagtgaacttccgcaaactgctgctcaaccgttgtcagaaggagttt
gagcgggacaaggtggatgatgtggtgtttgaaaggaaacagaaggaacttgactctgca
cagtccagtgatcaagagagactacggttagagctggaggaggccaaggacaaggcccgc
cggcgctccatagggaacatcaagttcatcggggagctgttcaagctcaagatgctgaca
gaggccatcatgcacgactgcgtggtcaagctgctgaagaaccatgacgaggaatcgctg
gagtgcctttgcaggctgctcaccacaatcggcaaggacctggactttgagaaggccaag
cctcgcatggatcagtatttcaaccagatggagaaaattgttaaggagcggaagacatcg
tctcggatacggtttatgctgcaggacgtgatagacctccgattgcacaactgggtgtcc
aggagagctgaccagggccctaagaccattgagcagatccacaaagaggccaagattgag
gagcaggaggagcagaggaaggtgcaccagcagctgctctccaaggacaccaagagaagg
ccagagcaacaacagcagcagagagaacagcaaagggagcagcagagggagcagcgtgtg
caacagagagacgagacctggaacactgtgcccatgaccaagaacagcaggacaatcgac
cccaccaagatccccaagatctccaagcctcagatggatgagaagatccaactaggacca
cgagcctcactcaactggatgaagggcagcagcggaggggccaaggccagtgactccgaa
ttatcccggtctggtggtggtggtgccagtttaaaccggtactctgcactccaatccact
caatctcatcaaaccaccccaccggcacagaacctagagtatgacactagaagaaccttg
ggcagtcgaagcagtgcagggagagagcgaagtgagaagcccctgagcccagctccgtcg
aggcccggttccttcgtccgaggcgggagtgccaaggagcttctggagagcccagccctg
agccctgaggagccccgcagagagctggagagccccagcgtaagcgaggacaagactgag
ccagagcgcagcagtgccagggagcctgtgaaagcagagcctgtggtggcccagtctcca
gacagacctgccctctctgaggaggagatggagaggaagtccagagctatcattgacgag
ttcttgcacatcaacgattataaggaggctgtacagtgtgtggatgagctggacatgtcc
tctcagctccatgtgtttgtgcgtgtgggggtggagtccactctggagcgcagtcagatc
acacgggaccacatgggcaagctcctcttccagttggtgcagcaggacatcctggccagg
tcccaattcttcaaagggtttgctgacacccttgagctggcggatgacatggccattgac
attccccatatctggctgtatctggccgagctgctcagccctgtgctgagagacaggggc
ttctctatgagagagctctttagtgaattaagcaaacctttacttcctgtgggaagagct
gggatcttattttctgaaatactgcgcatactatgcaaacaaatgagccataggaaagtg
ggcaccttgtggagagagtcgggcctcagctggagtgacttcttgccagagggagaggat
gtccaggatttcatctcagagcagaagctccagttcactgaggcggactgctccagccat
gaggcagccctcgccacgacagcactgtcccttgtggtgctcaaccagcagctagagaga
ctgctgctggaggacatggccagtgatgagcagatctttgactgggtagaggcaaatcta
gatgaatctcagatgagctcgtctcagttcctgagagctctgatgacggctgtgtgtaag
gcagcggtgaaagatgaaagtgcttcctgtcgagtggacgtagccatcattcagaggaga
ttgcccgtattactcaagtaccttaactcagacactgagcgacagcttcaagcactttat
gcactgcaggcgctgatagtcactttggatcagcctcctaacctgctccggatgttcttt
gattgtctgtatgatgaggacgtcatctcggaggacgctttttacaagtgggagaccagc
aaagacccagcagaggagctgggcaaaggtgtggctctcaagtctgtaacggctttcttc
acctggctgagggaagccgaggaggagtcagaggataattga
DBGET
integrated database retrieval system
