Oncorhynchus tshawytscha (Chinook salmon): 112254542
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Entry
112254542 CDS
T05605
Name
(RefSeq) claudin-19 isoform X1
KO
K06087
claudin
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04514
Cell adhesion molecules
otw04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
112254542
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
112254542
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
otw03037
]
112254542
04147 Exosome [BR:
otw04147
]
112254542
Cilium and associated proteins [BR:
otw03037
]
Other cilia and associated proteins
Stereociliary proteins
112254542
Exosome [BR:
otw04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
112254542
Exosomal proteins of colorectal cancer cells
112254542
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
PROL5-SMR
Motif
Other DBs
NCBI-GeneID:
112254542
NCBI-ProteinID:
XP_042180373
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All DBs
Position
LG07:complement(42854103..42879207)
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AA seq
222 aa
AA seq
DB search
MANSGFQLLGYFLALGGWIGIISTTVLPQWKQSSYAGDAIITAVGLYEGLWMSCASQSTG
QVQCKVFDSMLSLDVHIQTCRALMVVSVLLGFIGMIVSVVGMKCTKVGDNNPISKGRIAV
SGGALFLLAGLCTMVSVSWYATQVSYQFFNPNTPINARYEFGSALFVGWAAASLTVLGGS
FLCCSCSNEERRGQQYYRQSQPSTAREPNVKSSPPEKKEEYL
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
atggcgaactcgggtttccagttgctaggttacttcctggcattgggtggttggataggc
atcatctccaccactgtgctgccccaatggaagcagtcttcgtacgcgggtgacgccatc
atcacggctgtggggctctacgaaggcctgtggatgagctgtgcctcacagagtacggga
caggtgcagtgcaaggtgtttgactccatgctgtcactggatgtgcacatccagacgtgt
cgtgctcttatggtggtgtccgtgctgctgggcttcataggaatgatagtgagtgtggtt
gggatgaagtgcactaaagtgggcgacaacaaccccatctccaaaggacgcatagctgtg
tctggaggagccctcttcctgctcgcaggtctgtgcacgatggtgtctgtgtcctggtac
gccactcaggtgtcctatcagttcttcaacccaaacacaccaatcaatgccaggtatgag
tttgggtctgccctgttcgtgggatgggcggcggctagcttgactgttttgggcggatcc
ttcctgtgttgctcctgctccaatgaggagaggcgagggcagcagtactaccgccaatca
caaccatccacagccagggaaccaaatgttaaaagttccccaccagagaaaaaggaggaa
tacttatag
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