Oncorhynchus tshawytscha (Chinook salmon): 112254566
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Entry
112254566 CDS
T05605
Name
(RefSeq) serine/arginine-rich splicing factor 3 isoform X1
KO
K12892
serine/arginine-rich splicing factor 3
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03040
Spliceosome
otw05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112254566
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
112254566
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
otw03041
]
112254566
Spliceosome [BR:
otw03041
]
Common components
Common spliceosomal components
SR proteins
112254566
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_7
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
112254566
NCBI-ProteinID:
XP_024283030
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All DBs
Position
LG07:complement(43470195..43475920)
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AA seq
170 aa
AA seq
DB search
MADPAMHRDCPLDCKVYVGNLGNNGNKTELERSFGYYGPLRSVWVARNPPGFAFVEFEDP
RDATDAVRELDGRTLSGSRVRVELSNGEKRTRNRGPPPSWSRRPRDDHRGRRGSPPARRR
SPRRRSFSRSRSRSLSRDRKRERSLSRDRNHKPSRSFSHSRSRSRSTERK
NT seq
513 nt
NT seq
+upstream
nt +downstream
nt
atggcagatccagccatgcaccgagattgccctcttgactgcaaggtctatgtgggaaac
ctgggaaataatggcaacaagacagagttggagaggtcctttggctattatgggccactt
cgcagtgtctgggtagcaaggaaccccccgggctttgcttttgtggaatttgaagatcca
agggacgcaacagacgcagtgagggagcttgatggaaggacactaagtggttctcgtgtg
cgagtggagctgtccaatggtgagaaacgcacccgcaaccggggtcctcctccctcatgg
agcagacgtcctcgagatgaccatcgcgggcgtcgtggtagcccgcccgccaggcgcaga
tctccacgaaggaggagcttcagccgcagccgaagcaggtctctctccagagacaggaag
agggagagatctctgtcccgggacagaaaccataaaccctcaagatcattctctcactca
aggagccgctccagatctactgagagaaagtaa
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