KEGG   Oncorhynchus tshawytscha (Chinook salmon): 112254589
Entry
112254589         CDS       T05605                                 
Name
(RefSeq) methylosome protein 50
  KO
K13221  methylosome protein 50
Organism
otw  Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:otw00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:otw03041]
    112254589
Spliceosome [BR:otw03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   Other SAPs
    112254589
SSDB
Motif
Pfam: WD40_CDC20-Fz WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_RIG_2nd Beta-prop_EML_2 WDR55 Beta-prop_TEP1_2nd EIF3I Beta-prop_EML Beta-prop_EIPR1 WD40_RFWD3 Beta-prop_IFT140_1st Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR19_1st Beta-prop_WDR75_1st Beta-prop_SPT8 Beta-prop_DCAF4 WD40_MABP1-WDR62_2nd Beta-prop_TEP1_C Beta-prop_RIG_1st NBCH_WD40 Beta-prop_SCAP WD40_MABP1-WDR62_1st MIOS_WD40
Other DBs
NCBI-GeneID: 112254589
NCBI-ProteinID: XP_024283068
LinkDB
Position
LG07:complement(43867136..43877884)
AA seq 338 aa
MKSTVNANMIKENGWNIPPNAPACMEKHLESAQYRGDGTLLLGASSLTGRCWQGSIWVYC
DPKQSPKEGFCKAGVQTEAGITEAKWVSERGVLVASDSGAVELWELSEDESLLEKRFAKL
EHDHIVTSVSPAGSSHAISGSMDNRIKVWDLIQGEVVTTYNAHSKPVTCVSCNPSNDSLF
LSCGQDGRLLLWDRRKPTKPASRLDVEPSCCPTSVAWHPHHRTTIAYGDELGRVTLKDFQ
GTEPGQTQSTHSRRVSGLAFSSHSAPLLASISDDCTVAVMNSELKETLRDKRHQDFVRGV
CWAPGSSDTLTTVGWDHQVLHHVMGQDGPATGYSTSPL
NT seq 1017 nt   +upstreamnt  +downstreamnt
atgaaaagtacagtaaatgccaatatgataaaggaaaacggatggaacatacccccaaat
gcccccgcgtgtatggagaagcatttggagtcggcgcagtacaggggagatggcaccctg
ttgttgggggcctccagtctgacaggcaggtgctggcagggatccatctgggtctactgt
gatcccaagcagtctcccaaagagggcttctgtaaggctggtgtccagacagaggcaggc
atcacagaggcaaagtgggtttcagagaggggtgtcctagttgcatctgactctggtgct
gttgagctgtgggagctatcagaggatgagagtctgctggagaaacggttcgccaaactc
gagcatgatcacatcgttaccagcgtgagccctgctgggtcaagccatgccatcagcggc
agtatggacaaccgaatcaaagtctgggaccttattcagggtgaagtggtcaccacatat
aatgctcactcgaagccagtcacttgtgtgtcctgcaatccatccaatgactccctcttc
ctctcatgtggccaggatggtcgtttgttgctttgggacaggaggaaacccaccaaacca
gcctctagattagacgtagagcccagctgttgtcctacatcagtagcctggcatccccac
cacaggaccacaatcgcctacggtgacgagctgggacgagtgacactgaaggactttcag
ggaacagagcctggccagacacagagcacccacagccgcagggtctctggcctagccttc
tcatcacacagtgcccccttgcttgcctcaatcagtgatgactgcactgttgctgtgatg
aactctgagcttaaggaaacgttgagagacaagaggcaccaggactttgttcggggtgtc
tgctgggcccctggcagttctgacacactgaccactgtgggctgggaccaccaggtcctc
caccacgtcatgggacaggatggacccgccactggatactccacatccccactgtag

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