Oncorhynchus tshawytscha (Chinook salmon): 112254604
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Entry
112254604 CDS
T05605
Symbol
arhgef25b
Name
(RefSeq) rho guanine nucleotide exchange factor 25
KO
K20690
Rho guanine nucleotide exchange factor 25
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112254604 (arhgef25b)
Membrane trafficking [BR:
otw04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
112254604 (arhgef25b)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
PH
PH_10
SH3-RhoG_link
IQ_SEC7_PH
PH_19
Motif
Other DBs
NCBI-GeneID:
112254604
NCBI-ProteinID:
XP_024283084
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All DBs
Position
LG07:complement(44338505..44383181)
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AA seq
680 aa
AA seq
DB search
MKGGHHQRGCGCQHLFRKVLAKCGCCYARVRESYSVAGSEGSITPSVGSMANQASGISSP
CSTSSPGESRHSVSALKKWLTNPVRKLSVGGGGGVKGGGGCKEDRQVHRLDGKHPSPLLP
NGQALGRPLEQGENYTILPCTDVDLGNDALVSPATYSPTHPLCHSYLSDLLQDRDTHSLN
HHYSTILPEEVDGSSLIDDSTSQWSATMDSEEDRRSALEKSIYVLTELIETEKLYVDDLG
LIVEGYMASMATQGIPEDMKGKDKIVFGNIHQIYDWHKDYLLGELEKCVSEPDRLAQLFI
KHERRLHMYVVYCQNKPKSEHIVSEYIETYFEELRQQLGHRLQLNDLLIKPVQRIMKYQL
LLKDFLKYYTKAGRDTSELERAVEVTCFVPKRCNDMMNVGRLQGFEGKITAQGKLLQQDT
FTVSEQDSSFLSRAKERRVFLFEQLVIISEPIDRKKGFSLPGYTFKNSIKLSCLGVEDHC
EEDPCRLVLTSRGPDGSVTRFVLQASSPETRRAWVNDVVQILDTQRNFLNALQSPIEYQR
RESNSLGRAMRAPVATTSGLRPHSSASIDRHRLPYLHSYNTSLPSLHLPSQGPTAETQSP
LYLSPATPRPSHLPLKLTMSQEARHCQGVSNGLCPPTQHSLQGGTVCYHGAMPGEGGTYA
SHRSGNLDQLTELSLHEHEC
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atgaaggggggtcaccatcagcgggggtgcgggtgtcagcacctgttccgaaaagtactg
gctaagtgtggctgctgctacgcccgagttcgagagtcgtactctgtggccggcagtgag
ggcagcatcactccatccgtaggctctatggccaaccaggcctctggcatctccagcccc
tgctcgacctcctcccctggggagtcacggcactccgtcagtgccctgaagaagtggctc
accaaccccgtccgcaagctgagcgtggggggaggaggaggagtgaaaggaggaggggga
tgcaaggaggacaggcaggtccacaggctagatgggaagcatccctctcccctcctccct
aacggccaagcccttggaaggcctctggagcagggggagaactacacaatcctcccctgc
actgatgtggacttggggaatgatgccctggtgagtccagcgacgtactctccaacacac
cctctctgtcacagctacctatctgacctactacaggacagggatacacacagtctgaac
catcattattccactattctcccagaagaagtagatggctcctccctgattgatgactcg
accagccaatggtcagccaccatggacagtgaggaggacaggaggagtgccttagagaaa
agcatatatgtgctgacagagctgatagagacagagaagttgtatgtggacgacctgggc
ctcatagtagagggctacatggccagcatggccactcaagggattccagaggacatgaag
ggcaaagacaagatagtgttcgggaacatccaccagatctatgactggcataaagactat
ctcctgggggagctggagaagtgtgtgtcagagcccgacagactggcccaactcttcatc
aagcatgagcggcgtctccacatgtacgtagtgtactgtcagaacaagccaaagtcagag
cacattgtctcagagtatatcgagacctacttcgaggagctgaggcagcagctgggccac
agactacaactcaacgacctgctcatcaaaccagtacagaggatcatgaaataccaacta
ctgctcaaggacttcctgaagtactacaccaaagcaggaagggatacctcagagctggag
agagcggtggaggtgacgtgtttcgtgcccaagcgctgtaatgatatgatgaatgtgggc
agactgcagggctttgaggggaagatcacagcccaggggaagctgctccagcaggacacc
tttacagtcagtgagcaggacagcagcttcctgtcccgcgccaaggagaggcgtgtcttc
ctgtttgaacagctggtcattatcagtgagccaatcgacaggaaaaagggcttctctctg
ccagggtacacctttaaaaacagcatcaagctcagttgtctgggtgtggaggaccactgt
gaggaggacccatgtcgtctggtgctgacgtcccgcgggcctgatgggagcgtgacacgc
ttcgtcctacaggcatcgtcccctgagacgcgaagggcctgggtcaacgacgtggtccag
atcctggacacacagaggaacttcctcaatgctctccagtctcctatagagtaccagcga
agggagtccaacagcctgggacgagccatgagggcgcccgtggcaacgacctctggcctg
cgaccccactcctctgcctccattgaccgccaccggctaccttacctgcactcctacaac
acctctctgccctccctgcacctgcccagccagggacccactgcagaaacacagtcccca
ctgtaccttagccctgcaacaccccgtccctctcacctccctctgaagctcaccatgtcc
caagaggccaggcactgccagggggtgtccaacggcctgtgcccccctacccagcacagc
ttacagggtggtactgtctgttaccatggagccatgccgggggagggagggacttacgca
tcgcatcgctcaggcaacctggatcagctaactgaactctctctgcatgagcatgagtgc
tga
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