Oncorhynchus tshawytscha (Chinook salmon): 112254616
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Entry
112254616 CDS
T05605
Name
(RefSeq) coiled-coil domain-containing protein 174
KO
K25178
coiled-coil domain-containing protein 174
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
otw03019
]
112254616
03041 Spliceosome [BR:
otw03041
]
112254616
Messenger RNA biogenesis [BR:
otw03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
112254616
Spliceosome [BR:
otw03041
]
Complex C
Other components
EJC/TREX
112254616
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4078
Motif
Other DBs
NCBI-GeneID:
112254616
NCBI-ProteinID:
XP_024283101
LinkDB
All DBs
Position
LG07:44650124..44653923
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AA seq
508 aa
AA seq
DB search
MDKKKKQYAVTASSLVDLKAELYRKQEQFKHEKLVQDAGTSTKAPKSKKPNVWSKQNEGV
SERAQKDVELVAEEENNLDRAKRKLEEKAKLYEQMTKGDFLDEETEGLFLVDFTQKIIDK
KRENHAQRESEREDRESSSPIPPPENPGEEWVDYVDALGRSRRCMKKDLPGFKKMDKDFQ
GKRLDPAEKDLLSEDMRRELQRQEWEREEEEAMNRPVGPIHYENIREQEARELGVGYFAF
SQDQEQRRKQRETLDMLRDQTTDQRSKRDQLKEKRKTLLDARLAKVRQRKMKKAKLDGTE
DDQGDEHNQEGKEDLIGPLPPSGGAPEEAPALKKVVVEIQERRDTKPGIPHVREWDRGKV
DFFGEWTSRRRDERESEFAPPSAYFSNNKRQSYGKEAKREKDKPKMAFKWSEGQGGGCKV
PQANPKSTPVSQPQPRSTPLPQPSTPVPSQPQPTPSPAQPQNTVHLQNTPAPPEPQCPPQ
PPPQYPPLATAPTPIYTTTSTTTNTPSV
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atggataaaaagaaaaagcaatatgccgtgactgcttcatctctggttgatctcaaagct
gaactctataggaaacaagagcaattcaaacatgaaaaattggtgcaagatgctggaact
agtaccaaagcccccaaaagcaagaaacctaatgtatggagcaaacagaatgagggtgtt
tcagagcgggcacagaaagatgtggaactggtggcagaggaagagaacaaccttgacagg
gcaaagcgcaagctagaggagaaggcaaaactgtatgagcagatgaccaaaggagacttt
ctggatgaggagacagagggactttttctggtggatttcacccagaagattattgacaag
aagagagagaatcatgcccaacgagagagtgagagagaggatagagagagctcctccccc
atcccaccccctgagaacccaggcgaggaatgggtggattatgttgatgctctgggacga
tctcggagatgcatgaagaaagacctaccagggttcaagaaaatggacaaagactttcag
ggaaaaagacttgacccggctgagaaggacctgctgtcagaggacatgcgtagagagctg
caaaggcaggagtgggagagggaggaggaggaggccatgaacagacctgtgggtccaatc
cactatgagaacatcagggagcaagaggcccgtgagctgggtgtgggctactttgcattc
tctcaggaccaggagcagcgcaggaaacagagagagaccctggacatgctcagagaccag
acaacagaccagcgcagtaagagggaccagctgaaggagaagagaaagactttgctggat
gctcggctggccaaggtgaggcagaggaagatgaagaaggccaaactggacggaactgag
gacgaccagggagatgaacacaaccaagaagggaaggaggacctgattgggcccctaccc
ccatcaggtggagcacctgaagaggcccctgcattgaagaaggtggtggtggagatccag
gagaggagggacaccaagccaggaataccccacgtcagagagtgggacaggggcaaagtg
gacttttttggcgagtggacaagtcggcggcgggatgagagggagtcggaattcgcccct
ccctctgcgtacttcagcaataataaaagacagagctatgggaaagaggccaaacgtgag
aaggacaaacccaaaatggccttcaagtggtcagaggggcagggtggagggtgcaaggtg
ccccaggccaaccccaaaagtactcctgtatcccagcctcagcccagaagtactcctcta
ccccagccaagtacccctgtaccctcacaacctcaacccacaccatcccctgctcagccc
caaaacactgtccatctccaaaatacacctgcacctccagaacctcagtgccccccccaa
cccccacctcagtacccccccctcgcaacagccccaaccccaatatacaccaccacctcc
accaccacaaacacaccctcagtttga
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