Oncorhynchus tshawytscha (Chinook salmon): 112254617
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Entry
112254617 CDS
T05605
Name
(RefSeq) FYVE, RhoGEF and PH domain-containing protein 5 isoform X1
KO
K05724
FYVE, RhoGEF and PH domain containing 5/6
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
otw04990
]
112254617
Domain-containing proteins not elsewhere classified [BR:
otw04990
]
Pleckstrin homology (PH) domain-containing proteins
Dbl-Like RhoGEF family proteins
112254617
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RhoGEF
PH
FYVE
SOS1_NGEF_PH
RHG20_PH
PH_9
IQ_SEC7_PH
FYVE_2
Motif
Other DBs
NCBI-GeneID:
112254617
NCBI-ProteinID:
XP_024283102
LinkDB
All DBs
Position
LG07:44708883..44752733
Genome browser
AA seq
1542 aa
AA seq
DB search
MNTDFKKPPLAPKPKLVSHLSFKLPSPLMSRPCSSARGPKPPIAPKPKVPHDLERRDSSL
FSNNIQEGCANRDLLPSDEELDQENEPEDSLSGGEGLEEEPVEPQYYSDTLSSEVNENGC
EEQREQEEKMMQEEEEDWRLTDRIQTEEVDSLEMLTVSNAGFTIDSEDTVEMIDSYINDD
IDAEGSYAGEALADKDGLSVCDFSITSIEEEESACYPCETGPGKEERDVEEEREQEVECR
REEEKEAANSTADEVTESLSEEPIALIKDNKDDLVTQEPSSFKEDEEEAEESLPNPGSPH
NVLQEDDGNNLIGPSNERVERYQPFSIIDEDPMTIQYKMEGGECQLSHHKANQLFETEEE
AADPSLEPYYISTEDIVNPEQSLTEGKVHGLAESESTPEESSLATTETMEPSEYSAIGDN
DSLCDDMGKIECVSSEDYVEIDDDDNDDRENMTGSCQRRMPGFQTVEAFFNQSNNQPRFR
LLSISVPADTETSQVLLFSDSQLRSPDDSDVFRDEEDLEGHIIPYLDETTDTEEHLSDEH
VYEEAGLDSEGENFLPFDRKSIVTRSRSLSGKVPGYVPETVPEEAGSEFHVQNYCEVGLD
RRGPALSSSPMLNSTRAKSSSKPHRFLLYPRSFSMKGLDLPLSVYREGQGSPGERREDSL
SLPCVTGSSGSFSQRSPLPSSGLSTPTSMVDIPPPFELAYITKKPITKSSPSLFIEGDSP
DRQKKKKSSFKRFLKLKFRRKTESKLLVDVNVSSSRSSSESSHHGPARVLDSDRVSTGSS
PQLMSWTVSKPQRSPESPSTFLFYKDGKRKRGSVAFLNRSVARVESFEDRTLAPFTPLPL
TKPRSISFPNADTSDYENIPAQTLNSDYENIQIPSRRPVRPGTFAEFFDHPSRVLSSAND
TDGYVDMSSFPGYERNAQSSEQEPESAYTEAYTVCSLAVGPPGGSSGEARGGTAEEEDQG
RTSEEEEEGGEDNTYGRQSDGRSRAFYIAKELVDTERLHVKALKLLQVDFREAVGAAVGD
EGDPVLEEERLREILNKLPDVYTLHRRILTELENRIRQWEESQRIADVILSRKLEFVVFT
AYIGHYDRSMSLLDESCRTSPAFSAIVSQYEQSPAGDNVSLKHQLLQVIVRVAQYRMLLT
DYLNNLSPDSKEYEDTQAALVVVSDIADQANDSLKHGENLLRLVNIEYSVGGQRDLLQPG
RVFVKEGTLMKVSRKCRQPRHLFLMNDVLLYTYPQQDGKYRLKNSLPLTGMKVSKPIIEN
VQNALSIEGADISITLAASSCSEREDWFHTLSRTVSDHARGPAPFSSCSGEARERLCLSL
GEKAPTLVPVSHVMMCMNCTSDFSLTLRRHHCHACGRIVCRSCSRNRTPLKYLEDRMANV
CDHCYSELQKRGVNVSGVSGTDSPRSNRRSIRPLSAVFQNFHPPSLWRRKGTASLTQVSV
SEEGSMSGTLQRSKRSKRNWKRLWFLLKDKVLYTYQACEEKVASESLPLLGFTVKLPDRP
GGAETTNVFELYHKKTLYYTFKAEDNHTAKRWVNAMEEATVL
NT seq
4629 nt
NT seq
+upstream
nt +downstream
nt
atgaacacagattttaagaagcctcctcttgctcctaaaccgaagcttgtgagtcacctc
tccttcaagctgccatccccactcatgtcccggccctgctcctcagccaggggccccaaa
cctcccattgcccccaaacccaaagtaccacatgaccttgagaggcgtgactcttccctg
ttctccaacaacatccaggaggggtgcgccaacagggacctgctgccctcagacgaggag
ctggaccaggagaacgagccagaggactctctgagtggaggggaggggctagaggaggag
ccagtggaacctcagtattattcagacactctcagttcagaggtcaatgagaatgggtgt
gaagagcagagggaacaggaggaaaagatgatgcaggaggaagaggaggactggaggtta
actgacaggattcaaacagaggaggtggattctttggaaatgctgacggtcagtaatgct
ggattcacaattgactcagaggacacggtggagatgatcgattcgtacatcaatgatgac
atcgacgctgagggcagctatgcaggcgaggcactggccgacaaagatggcctctcagtg
tgcgacttctccataaccagcattgaggaggaggagtcagcatgctacccctgtgaaact
gggcctgggaaagaggagagggatgtagaggaggagagggagcaggaggtggagtgccga
agagaggaagaaaaagaagcagctaatagcacagcagacgaagtaacagaatctctttct
gaggaacccatagctctcatcaaagacaacaaagatgaccttgttacccaagagccttca
tccttcaaggaggatgaggaggaagcagaggaatccttacctaaccctggtagtcctcac
aatgtcctacaggaggacgatggaaataatttaattggtccctcaaatgagagagtagaa
aggtaccaaccattttccatcattgacgaagaccccatgactattcagtacaaaatggaa
ggaggtgagtgccaactaagtcaccataaagcaaatcaactctttgagacagaggaagaa
gcagctgaccccagcctggagccttattacatctcaactgaggacatcgtgaacccagag
cagagcctcacagagggcaaagttcacggattggcagagagtgagagcactccggaggaa
tcttcactggccaccacagagaccatggaacccagtgagtattcagccataggtgacaat
gactcgctgtgtgatgacatggggaagattgagtgtgtctcctctgaggactacgttgag
atagatgatgatgataatgatgacagggagaacatgacaggttcatgtcagagaaggatg
cctggattccagacggtggaggctttctttaaccagagtaacaaccagccccgtttcagg
ctgctgtccatctctgtgccagcggacacagagacctcacaggtcttgttgttctctgac
agccagctgcgctccccagatgactctgatgtgttcagggatgaggaggacctagagggc
cacatcattccctacctggatgagacaacagacacagaagagcacctcagtgatgagcat
gtctacgaagaggccggcctggactcagagggggagaatttcctgccttttgacaggaag
tccattgtcaccaggtcccggtcactgtcggggaaagtgcctggttatgtacctgagacg
gtccctgaggaggcgggctcagagttccatgttcagaactactgcgaggtgggattggac
cggaggggacccgcattgagcagcagccccatgttaaactcaacccgggccaagagctca
tccaaaccacatcgctttctcctgtacccccgctccttctccatgaagggacttgacctg
cccctaagtgtgtacagggagggccagggttccccaggggagaggagggaggacagcctc
tctctgccgtgtgtcacgggctcttctggaagcttctcccagcgaagccccctgccctcc
agcggcctgtccacccctacatcaatggtggacatccctcctcccttcgagctggcctac
atcaccaagaagcccatcaccaaaagttctccgtccctgttcatcgagggagactcccca
gacaggcagaagaagaagaagtcctccttcaagcgcttcctgaagttgaaattcaggaga
aagacggagagcaagctgctggtggatgtcaacgtttcctcctccaggtcctcctctgag
tccagccaccacggtcctgccagggtccttgattcagacagggtcagcacaggcagctcc
ccgcagctcatgtcctggacagtcagtaagccccagcgctctccagagtccccatccacc
tttctgttctataaggacgggaaaagaaaaaggggttctgtggctttcctcaaccgcagc
gtggcccgggtagagtccttcgaggatcgcactcttgcccccttcacccccctccccctg
actaaaccccgctccatctccttccccaacgctgacacatcagactacgagaatatcccc
gcccagactctcaactccgactatgagaacatccagatcccctctcggaggcctgtacga
ccggggacctttgcagagttttttgatcatccgagtcgggtgctgtcttctgccaatgac
accgatggttatgtggatatgagtagcttccctgggtatgagagaaatgctcaatcgtct
gagcaggagcctgaaagtgcctatacagaagcctacaccgtgtgctccctggctgttggt
ccccctggtgggtcatcgggtgaggcgaggggagggacagctgaggaggaggaccaagga
cgcacctctgaggaggaggaggagggaggagaagataacacatatggcagacagagcgat
ggtcgatccagagccttctacattgccaaagagctggtggacactgagagattacatgtg
aaagccctcaagcttctccaggtggacttcagggaggcggtgggggctgcagtaggggat
gagggggatcctgtgctggaggaggagaggctaagggagatcctcaacaagctgcctgat
gtttacactctgcaccgcagaatcctcaccgagttagagaaccgcatccgacagtgggaa
gagagccagaggattgcggatgtcatcctatccaggaagttggagtttgtggtcttcacg
gcctacattggtcactacgaccgcagcatgagtctgctggacgaaagctgccggacctcg
cccgccttctcagccatcgtcagccagtatgagcagagtccagcaggtgacaatgtctct
ctgaaacaccaacttctgcaggtcatcgtacgcgtggctcaataccgcatgctcctcacc
gattacctcaacaacctctccccagactccaaagaatacgaagacacacaagctgctctg
gtggtagtctcagacattgcagatcaagccaatgacagtttgaaacatggggagaacctg
ctacgtcttgtcaacatagagtacagtgttggaggccagagggatctgctccagcctggc
agggtgtttgtgaaggagggcactctgatgaaggtcagcagaaagtgcagacagccacgc
cacctgtttctgatgaatgatgtgctgctgtacacctaccctcagcaggacgggaaatac
agactgaagaatagcctcccactgactgggatgaaggtcagtaaacccatcatagagaat
gtacagaatgctctgagtatcgagggagcagacatctccatcaccttggcagccagctcc
tgtagtgagagagaggactggttccacactctgagtcggacagtgtctgaccacgccaga
ggacctgcgccattcagcagctgctctggagaggccagagagcgtctgtgtctgtccctg
ggggagaaggctcctactctggtgcctgtatcccatgtgatgatgtgtatgaactgcacc
tcagacttcagcctcacactgcgcagacatcactgccacgcctgcgggaggattgtgtgt
cggagctgctccaggaaccgaacccctctgaagtacctggaggaccgcatggccaacgtg
tgtgaccactgttacagcgagctccagaagagaggagtaaatgtgtctggggtgagtggt
actgacagtcctcgttctaatcgccgctccatccgcccgctctctgccgtcttccagaac
tttcaccctcccagcctgtggagacgcaagggtaccgcctctctgacccaggtgagtgtg
tcagaggagggctctatgagcgggactctgcagcgcagtaagaggagcaagaggaactgg
aagaggctgtggttcctcctcaaagacaaggtgctttacacctaccaggcctgcgaggag
aaggtggcgtctgagagtttgcctctgttgggcttcacagtgaagctgcctgacaggcca
ggtggagcggagactaccaacgtctttgagctgtaccacaagaagaccctgtactacacc
tttaaggccgaggacaaccacactgctaagagatgggtgaacgccatggaggaagccaca
gttttatag
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integrated database retrieval system
