Oncorhynchus tshawytscha (Chinook salmon): 112254649
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Entry
112254649 CDS
T05605
Name
(RefSeq) SLIT-ROBO Rho GTPase-activating protein 3 isoform X1
KO
K07526
SLIT-ROBO Rho GTPase activating protein
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112254649
Membrane trafficking [BR:
otw04131
]
Endocytosis
Bin/Amphiphysin/Rvs (BAR) family proteins
F-BAR proteins
112254649
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
112254649
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
FCH
SH3_1
SH3_2
SH3_9
FlaC_arch
Motif
Other DBs
NCBI-GeneID:
112254649
NCBI-ProteinID:
XP_024283145
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All DBs
Position
LG07:complement(46465635..46584293)
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AA seq
1102 aa
AA seq
DB search
MSSQTRVKKDKEIIGEYETQVKEIRNQLVEQFKCLEQQSESRIQLLQDLQDFFRRKAEIQ
LEYSRSLEKLAERFSNKIRSSREHHQFKKDQHLLSSVNCWYLVLNQTRRESRDHATLNDI
YTNNVIVRLAQISEDVIRLFKKSKDIGIQMHEELVKVTNELYTVMKTYHMYHTESISAES
KLKDAEKQEEKQFSKSADLNVHLLRHEDRPQRRSSVRKIEKMKEKRQAKYSENKLKCTKA
RNDYLLNLAATNGVVAKYYIHDVSDMIDCCDLGYHASLARTFRTYLSAEYNLETSRHEGL
DIMENAVDNLDSRSDKHKIMDMHNQVFCPPMRFEYLPHMGDEVCQVSAQQPVQTELLMRY
HQLQSRLATLKIENEEVRKTLDATMQTMQDMLTVEDFDVSDAFQHSRSNESMKSVASETY
MSKLNVAKRRANQQETEVFYFTKFKEFLNGSNLIIKLQAKHDLLKQTLGEGERAECGTTR
PPTLPPKPQKMRKPRPRSIYNHKLFNGNMETFIKDSGQPIPLVVESCIRHINLYGLQQQG
IFRVPGSQVEVNDIKNSFERGEDPLIEDQNEHDINSVAGVLKLYFRGLENPLFPKERFLD
LMSTIKLESGAERAHHVQQIVVTLPRTVIIVMRYLFAFLNHLSQYSDENMMDPYNLAICF
GPTLMPIPDGQDPVAIQAHVNEVIKTIIIHNEVIFPSHRELDGPVYEKCMTGGEEYCDSP
HSEPGTIDEADNGTEPHTSDDEVEQIEAIAKFDYVGRTPRELSFKKGASLLLYHRASEDW
WEGRHNGVDGLIPHQYIVVQDLDDAFSDNLSQKADSEASSGPLLDDKASSKNDVPSPCEH
SPDCNFGGVMGRVRLRSDGAAIPQRRSGETHSPPRGTDTPPRAAACPSSPHKMVVSRSRM
ESPEKRRLGTFGSAGSINNADRKVYPEGHPLRHVPGATRHSSLGDHKSLEADALAEDIEK
TMTTALHELRELERQNMGKQAPDVVLDTLDTTMKKPVNSEPGSPLHTIMIRDPDAAMRRS
SSSTSEMMSTFKPALSARLAGAQLRPPPMRPVRPPPTGHRSSSSSSSGVGSPAVTPTEKI
FPNSTAAASSAANAAGDKSGTM
NT seq
3309 nt
NT seq
+upstream
nt +downstream
nt
atgtcatctcaaactagagtcaagaaggacaaggagatcataggagaatatgaaactcaa
gtcaaagagatccgtaaccagctggtggagcagttcaaatgcctggagcagcagtccgag
tctcgtatccagctgctgcaggacctgcaggacttcttccgccgcaaggctgagatccag
ctggagtactcccgcagcctggagaaactggccgagcgattctccaacaagatccgcagc
tccagagaacaccaccagttcaagaaggaccaacacctgctgtccagtgtgaactgctgg
tacctggtactgaaccagaccaggagagagagcagggaccacgccaccctcaatgacatc
tataccaacaacgttatcgtccgcctcgcccagatcagcgaggacgtaatccgcctcttc
aagaagagtaaggacattgggattcagatgcatgaggagctggtgaaagtgacaaacgaa
ctctacactgtgatgaagacctaccacatgtaccacacagagagcatcagcgctgagagc
aagctgaaggacgctgagaagcaggaggagaagcagttcagtaagtctgctgacctcaac
gtccacctgctgcgccacgaggaccggccccagagacgcagctccgtcaggaagattgag
aagatgaaggagaagaggcaagccaagtactccgaaaacaagctgaagtgcactaaagcc
cgcaacgactatttgttgaacctggcagcaacgaatggcgttgtggcgaaatactacatc
cacgatgtctctgatatgattgattgctgcgacctgggctaccatgccagcctggcacgt
accttcaggacctacctgtcagctgagtacaacctggagactagtcgccacgagggcctg
gacatcatggagaacgccgtggacaacctagactcccgcagcgacaagcacaagatcatg
gacatgcacaaccaggtgttctgccctcccatgcgcttcgagtacctgccccacatgggg
gacgaggtgtgtcaggtgagtgcccagcagcctgtgcagactgagctcctgatgcgctac
caccagctgcagtcccgcctggccacgctcaagatcgagaacgaggaggtgaggaagaca
ctggacgccaccatgcagaccatgcaggacatgctgactgtggaggactttgatgtgtcc
gatgctttccaacatagccgctccaatgagtccatgaagtctgttgcctctgagacctac
atgagcaaactgaacgtggccaagagacgggccaaccagcaggagacagaggtcttctac
ttcactaaatttaaggagttcctgaacggcagcaacctcatcattaaactgcaggccaag
catgacctcctgaagcagacactgggagaaggagaaagggctgaatgtgggactacgagg
ccccccactctaccccctaaaccacagaaaatgcggaagcctaggccgcgctccatctat
aaccataaactgtttaacggcaatatggagaccttcatcaaggattcaggtcaacctatt
cctcttgtggttgagagctgtattcgacacatcaatttgtatgggctccagcagcagggc
atattccgtgtgcctggatcccaggtggaggttaatgatattaaaaactcatttgagaga
ggcgaagacccattgattgaagaccagaatgaacatgacatcaactcagtggcaggggtc
ctcaagctgtacttcaggggcctggagaaccctctgttccccaaggaacgcttcctggac
ctcatgtctactatcaagctggagtctggagctgagagagcgcatcacgtccagcagatt
gttgtgactcttcctcgcaccgtcatcatcgtcatgagatacctgttcgctttcctcaat
catctgtcccagtacagtgatgagaacatgatggatccctataacctggccatctgcttc
ggccccaccctgatgcccatccccgatggacaggaccctgtagccatccaggcgcatgtt
aatgaggtcatcaagaccatcatcatccacaacgaggtcatcttccccagccaccgtgag
ctggacgggccagtctatgagaagtgcatgactggaggagaggagtactgtgacagcccc
cacagtgagccaggcacaattgatgaggctgacaacgggactgagccacacaccagtgat
gacgaggtggagcagattgaggccatcgctaagtttgactatgtggggcgcaccccccgg
gagctatcctttaagaagggagcgtcactactgctgtatcaccgcgcctccgaggactgg
tgggaggggcggcacaacggtgtggacggactgatcccacaccagtacattgtggtgcag
gacctggatgatgcgttctcagataatctcagtcagaaggcggacagcgaggcgagcagc
ggaccactgctggatgacaaggcctcatccaaaaacgatgttccatcaccgtgtgaacac
tcccccgactgcaactttggaggagtcatggggagggtgaggctacgttctgacggggcc
gccatccctcagcgccgcagcggagagacccacagccctccccggggcacagacacaccc
ccgcgggccgcagcctgtcccagtagcccccacaagatggtagtgagcaggagtcgcatg
gagagcccggagaagaggcgcctgggcacatttggcagtgcgggcagcatcaacaatgct
gacaggaaggtctaccccgagggccaccccctgagacacgtaccaggggccacacgccac
agcagcctgggggaccacaagtcactggaggctgatgccctggcagaggacatagagaag
accatgaccacggccctacatgagctgcgtgagctggagcgccaaaacatgggcaaacaa
gcaccagacgtggtgctggataccctggacaccaccatgaagaagcctgtgaactcggag
cccggcagccccctccacaccatcatgatccgcgacccggacgccgccatgcgccgcagc
agcagctccacctctgaaatgatgtccacctttaagcctgccttgtcggcacgtctggcc
ggagcccaactgcgccccccgcccatgaggcccgtccgcccgccccccaccgggcaccgc
tcctccagctccagttcctccggggtaggaagccctgctgtcacccccactgagaagatc
ttccccaacagcactgccgcggctagctccgcagctaacgcagccggggacaagtcaggc
accatgtaa
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integrated database retrieval system
