Oncorhynchus tshawytscha (Chinook salmon): 112254653
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Entry
112254653 CDS
T05605
Name
(RefSeq) la-related protein 4 isoform X1
KO
K18763
la-related protein 4
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
otw03019
]
112254653
Messenger RNA biogenesis [BR:
otw03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
112254653
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Gene cluster
GFIT
Motif
Pfam:
La
RRM_fung
Se_S_carrier
Motif
Other DBs
NCBI-GeneID:
112254653
NCBI-ProteinID:
XP_024283150
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Position
LG07:46807186..46842532
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AA seq
791 aa
AA seq
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MSSEHCPSSPQQKERVKPALDKREQGEITSKTVKDQGGMVTTKGAGLNPNAKVWQEIPVP
QSQVPEDGTEGTHWLETTPTSADVTEGYSEAPPTEDKGYGTEYSDPSDNSARLPTEGVLN
GMDPPKLGYPLYDSVTESAVEEQQPLSEESLRESLKKQLEFCFSRENLSKDLYLMSQMDS
DHFVPIWTIASIEGIKVLTTDMDLILEVLRASPMVQVDEMGEKVRPNHKRCIIILREVPE
TTPVEDVEGLFKNENCPKVMSVEFAANNNWYITFQSDTDAQQAHRYLREEVKTFQGKPIM
ARIKAINTFFAKNGYRSVPNSSVYSQQGQSQYNSTHLYMQQVFSPQQQYPLYPLVPPTWN
PSPAPYFQTPLAPFPNSGFVNGFSTPGNYKTGTSPLGLGRPPFNRNRNHAKSQPRPCDET
PPSVTPVSPLVDGLSGPSSAPPPRAAGAPMGSTPEPGPLPPTLRDTLPLAAEGMPNGDLG
IAGRGRRGSYRGMRRKREDERITRPIPLSEIKVPQPKFDLATSNFPPLPGCVVSTQGEPV
LETRMSDVVRGLKVTSDKPDVNKESEAPPASAQKEAVSAPSQVVPAHKPPTPLVVEPPVP
SVAHPVKKVEKPEPHVQKELAPPPTPPSSLPTPPQPAAATKPTPTHSQSISTATPFPATT
TPAPESRKLSYAEMCKRPATQPPAPSTSPNPPTSPASQPLRELRVNKADEPATSSSSDGD
RPEKPERPGEGQPHLDPFGSYCGVNGPARSGGMGLKYREQQRGASMSRRISPQGWARRSG
KEQNIPPRSPK
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
atgagttcggagcattgcccgtcgtcgccgcagcagaaggaaagggtcaagccagcattg
gacaaacgtgaacaaggggagataacatcgaaaaccgtgaaggatcaaggcggcatggtc
accacaaagggagcagggctaaaccccaatgccaaagtctggcaggagatccctgtgccc
cagagccaagtcccagaggacggcacggagggcacccactggctagagactacccccact
tctgctgatgtcactgagggttattcagaggctcccccaactgaggataaggggtacggc
acggagtactcagacccgtcggacaatagtgcccgtttacccacagagggtgtactgaac
ggcatggatccccctaagctggggtaccccctctatgactctgtgactgagtcagcagtg
gaggaacagcagcccctctctgaagagagcctgagagagtctctgaagaaacagctagag
ttttgcttctcaagagagaatctgtccaaggatctgtacctgatgtcccagatggatagt
gatcactttgtccccatctggaccatcgccagcattgagggcatcaaggtcctcactacc
gacatggacctcatcctggaggtactacgagcctcgcccatggtgcaagttgacgagatg
ggggaaaaggttcggcccaatcacaagcgctgcatcatcattctgagggaggtgccagag
accacacctgtagaggacgtggagggcctctttaagaatgaaaactgtcccaaggtgatg
agtgttgaatttgcggccaacaacaactggtacatcacattccagtcggacactgatgca
cagcaggcccacagatatctaagggaagaagtgaaaacatttcagggaaaacccatcatg
gctcgtatcaaggccatcaatacattctttgcgaagaatggctaccgtagtgtaccgaac
tccagtgtgtacagccagcagggccagtcccagtataactcaacacacctctacatgcag
caggtgttcagcccccagcagcagtacccactctaccccctggtgccacccacctggaac
ccatcgcctgccccttacttccagaccccgctggccccgttccccaacagtggctttgtg
aatggcttcagcacccctgggaactacaagactggcaccagtcccttgggcctcggacga
ccgcccttcaacagaaaccggaaccacgcgaagagccagccccggccatgtgacgagacc
cctccctctgttacccccgtatcccccctggtggatggcctgtcgggcccctccagcgct
cctcctccccgggcggcaggggctcccatgggtagcacccctgagcctggccctttgccc
cccaccctcagggacaccctgccactggctgcagaggggatgcccaatggagacctgggc
atagctggcaggggcaggagaggcagctacagagggatgcggaggaagagagaggacgag
aggatcacgaggcccatccctctgagcgagataaaggttccacagcccaagtttgacctg
gcgacctccaacttccctccgttgcctgggtgtgtggtcagcacgcagggagagcccgtg
ctagagactcgcatgtctgatgtggttcgaggcctcaaggtgaccagcgacaagcctgat
gtgaataaggagtctgaggcccctcctgctagtgcccaaaaggaggctgtgagtgcgccc
agtcaggtcgtgccggcccacaaaccccccacccctctggttgtggagccccctgttcca
agtgttgctcatccggtgaagaaagtggagaagcctgagcctcatgtccaaaaagagctg
gctccaccccccacaccaccctcttctctgccaacccccccacagcccgccgctgcaacc
aaacctacgcccacccacagtcagtccatctccactgcaacaccatttcccgccactacc
acacctgcaccggagtcaaggaaactgagctatgctgagatgtgcaagcggccagccacc
cagcctccagcgccaagcacctccccaaaccctcccacctccccggccagccaacccctg
cgtgaactgcgggtcaacaaggccgacgagcccgccacatcctccagcagcgatggggat
aggcctgagaaacccgagcggcctggagaaggccagccccaccttgatccctttggctca
tactgtggggttaatggccctgcccgatccggagggatgggcctaaagtaccgggaacag
cagagaggtgcgtccatgagccgccgcatctccccccagggctgggccagaaggagcggg
aaggaacagaacattcccccccggtcaccaaagtag
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