Oncorhynchus tshawytscha (Chinook salmon): 112254761
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Entry
112254761 CDS
T05605
Name
(RefSeq) TBC1 domain family member 20 isoform X1
KO
K20372
TBC1 domain family member 20
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112254761
Membrane trafficking [BR:
otw04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
112254761
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
Motif
Other DBs
NCBI-GeneID:
112254761
NCBI-ProteinID:
XP_042180519
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Position
LG07:50484498..50492609
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AA seq
402 aa
AA seq
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MKRSRSVGASSPLNGIGKQDGDSRRKRKVAEISQALNVTPVDVAALRRMAISEGGLLTDE
IRCKVWPRLLNVPTDTLPEKPEEIERENNKDYNQVLLDVQRSLKRFPPGMPDKQREGLQE
ELIDIILRVLGRNTQLHYYQGYHDIVVTFLLVLDERLATALVEKLSTHHLRDFMDPTMDN
TKHILNYLMPIIERINPEVHDFMQQAEVGTIFALSWLITWFGHVLSDFRHVVRLYDFFLA
CHPLMPIYFAAVIVLYREDEVLDCECDMASVHHLLSQIPQDLPYETLISRAGDLFVQFPP
SELAREAAQQYSQQTAASTFKDFDLVSEQQRPDSVLRRRLREKQALEGAAAGAMVAMTQP
TVARRFVRLAVMGLTVALGAAALTLVNTALEWVPKLDLHLFP
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagatctagaagtgttggtgcgtcttcacctttgaatgggataggaaaacaagat
ggcgactcccggaggaagaggaaggtggcagagatctctcaggccctgaatgtgacgccg
gtggatgtggcggcactaaggaggatggccatcagtgagggggggctgctcacagacgaa
atccgctgtaaagtgtggccccggctgctgaacgtgcctaccgacaccctccctgagaaa
ccagaggaaatagagagggagaataataaggactataaccaggtgctgttggatgtccag
cgttcccttaaaagattccctcctggcatgccagacaagcagcgtgagggcctccaggag
gagctgattgacatcatcctgcgggtgctgggaaggaacacccagctgcactactaccag
ggctaccacgacatcgtggtcaccttcctacttgtgctggacgaacgtctggccactgct
ctggtagagaaactctctacgcaccacctcagggactttatggaccccaccatggacaac
actaaacacatccttaactatctgatgccaatcatcgagaggatcaacccagaggtgcat
gacttcatgcagcaggcagaggtaggcaccatctttgcccttagctggctcatcacctgg
tttggccacgtcctatcagatttccgccacgttgtgcggttgtatgacttcttcctggcc
tgccatcctctgatgccaatctactttgctgctgtgattgtgctgtaccgagaggacgag
gtgttggactgtgagtgtgacatggcgtcggtgcaccacctcctgtcccagatcccccag
gacctgccctacgagacactcatcagccgtgcaggagacctctttgtccagttccccccc
tccgagctggccagggaggctgcccaacagtacagtcaacagacagcagcttccaccttt
aaagactttgacctggtctcagagcagcagcggcctgactcagtcctgcgaaggcggctg
agggagaagcaggcgctggaaggagcagctgcaggggccatggtggcgatgacacaaccc
actgtggcccgacgcttcgtacgactggccgtcatggggctcactgtggctctgggggca
gctgccctcaccctggtcaacacagccctggagtgggtgcccaaactggacttgcatctc
ttcccctga
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