Oncorhynchus tshawytscha (Chinook salmon): 112254765
Help
Entry
112254765 CDS
T05605
Symbol
sox12
Name
(RefSeq) transcription factor SOX-12
KO
K09268
transcription factor SOX11/12 (SOX group C)
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112254765 (sox12)
Transcription factors [BR:
otw03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
112254765 (sox12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
Rox3
SOG2
Motif
Other DBs
NCBI-GeneID:
112254765
NCBI-ProteinID:
XP_024283360
LinkDB
All DBs
Position
LG07:complement(50621422..50624407)
Genome browser
AA seq
396 aa
AA seq
DB search
MTPAVILSRASSSIMVQQRGHKYPAVMDSDMSQEVFLGLGADDREEIFGRLPSNKDPNWC
KTPTGHIKRPMNAFMVWSQIERRKIMEQWPDMHNAEISKRLGKRWKLLPDYEKIPFIKEA
ERLRLKHMADYPDYKYRPRKKSKSSIPVRVGDKVPLKTSKSHQGGRASASATSTATSRGL
KIRIPSSKHRASFDSNKFKGYDEGISDDDTVDVELASPMTSQPGGHRPAVGVFHHQQAAM
TPGAQQTQLAAQLRVKVSTTTSKLPVGLSSGSPVPHSLPESSPRVSSSSEPLAPFSSTGR
SSTGRSSTPTSTSSSSFVSSASSDEELDEEILHIISNANFDTMPMDCSTLDKDFDATFHT
NSGSHFDFPDYCTPEVNEMISGDLLVPSISDLVFTY
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgactccagccgtcattttgagtagagcgtcttcctccatcatggtacagcaaagggga
cacaaatacccagcagttatggacagtgatatgagccaagaggttttcttgggactgggt
gcagatgacagggaggagatttttggacggttgccctccaacaaagaccccaactggtgc
aagactcccacgggtcacatcaagaggcccatgaatgcattcatggtctggtcgcagatc
gagagacggaagatcatggaacagtggccagacatgcacaatgcagagatctccaaacgc
ctaggcaagcgctggaaactcctccccgactatgagaagatccccttcatcaaggaagcg
gagaggctccggctaaagcacatggccgactaccccgactacaagtacaggccccggaag
aagagcaagagttccattcccgtgcgggttggggacaaggtccccttgaagacaagcaag
tcccaccagggtggtcgcgcatctgcttccgcaacctccaccgccaccagcagagggctc
aagatacgaatcccttcctccaaacacagagccagcttcgacagcaataagttcaaaggt
tacgatgagggcatcagcgatgatgacacagtggatgtagagttggccagtccgatgacg
agccagccaggagggcataggccagccgtgggtgtcttccaccaccagcaggctgccatg
acccccggtgcgcagcagactcagcttgcagcccagctcagagtcaaagtgtcgaccacc
acctccaagctgcctgtgggcctctcctctgggtctccagtaccccacagcctcccagag
tcatcccccagggtgtcctcttcctcggagcctctggctcccttctcctccaccggccgc
tcctccaccggccgttcctccacccccacctccaccagctcctcctccttcgtgtcgtcg
gcctcctccgacgaggagctggacgaggagattttgcatattatctccaacgccaacttc
gacaccatgcctatggactgctccactctggacaaagactttgacgctacatttcacacc
aactcaggatcccacttcgatttccctgattactgcaccccggaagtgaatgagatgata
tccggggacttgctggtgcccagtatctctgacctggtgttcacctactga
DBGET
integrated database retrieval system
