Oncorhynchus tshawytscha (Chinook salmon): 112254810
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Entry
112254810 CDS
T05605
Symbol
trub2
Name
(RefSeq) mitochondrial mRNA pseudouridine synthase TRUB2
KO
K23497
mitochondrial mRNA pseudouridine synthase TRUB2 [EC:5.4.99.-]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
otw03029
]
112254810 (trub2)
Mitochondrial biogenesis [BR:
otw03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
112254810 (trub2)
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
PseudoU_synth_2
Motif
Other DBs
NCBI-GeneID:
112254810
NCBI-ProteinID:
XP_024283458
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Position
LG07:complement(52510182..52513887)
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AA seq
342 aa
AA seq
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MARPSVRVFHKLEGLFSIYKPPGVHWKLVRDTIETNLLKGINAAPPPAPRQRVQFLAEST
SVVAEGSNELTLSAASVPALAHHPLVSGPDFQHIGVGVGHRLDVFSSGVLVLGVGQSNKA
LTDLYRSHVTRDYTLEGELGMATDNFSHTGRLIERTTYDHITRDKLERVLAMMQGSNQKA
LLTYSKVDMSTQGAYELAVKGELRPDGKSPPIMTGLRLLHFQPPHFTLEVQCLNETQRYL
CRILHEVGLELRSTAVCKGVRRTRDGPFTIQHALTHQHWTSPDVIQAIRQYRSSRKASKA
KHTQPGKDTGTASQRQEMAEEAAVTGDSHRLHSVLTSKAFGS
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atggcgaggccatctgttcgcgtgtttcataaactagagggattgttttccatttacaaa
ccccccggtgtccactggaaactcgtccgggataccatcgagacaaacctgctcaaaggg
ataaatgctgcccctcctccagcccctcgtcagcgggtccagttcctggctgagtccacc
agtgttgtggctgagggttccaatgagctcaccttgtctgcagcctctgtcccagctctg
gctcatcaccctctggtgagtggacctgatttccagcatataggagtaggagtgggacat
cgcctggacgtattctcctctggagttctagttctaggtgttggccagtcaaacaaggct
ctgactgatctctacagatctcatgtcactagagattatacattggaaggtgaattgggg
atggccacagataatttctctcacacaggccgcctcatagagaggaccacatatgatcac
attacacgggacaagctggagagagtcctggccatgatgcaaggatccaatcagaaggcc
ctgctcacgtactctaaggtggacatgagtacccagggggcctatgagctggctgtgaag
ggggaactgcgtcccgacgggaagtctccccctattatgacaggcctgcgtttattacac
ttccaaccaccccattttaccttggaggtgcagtgtttgaatgaaacccagcggtacctg
tgcagaatcctgcatgaagtgggcttggagctccgcagcacggccgtatgtaagggagtg
cgccgcactcgagacgggcccttcaccatacaacacgccttgacccatcaacactggact
tccccagatgtcatacaggccatcagacagtaccgctcttccagaaaggctagcaaagcc
aagcacacacagccagggaaggatacaggaacagccagtcagagacaggagatggcagag
gaagcagcagtcactggtgattcccaccggttacactctgtattgacctcaaaagcattt
ggctcttga
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