Oncorhynchus tshawytscha (Chinook salmon): 112254812
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Entry
112254812 CDS
T05605
Name
(RefSeq) serine/arginine-rich splicing factor 3 isoform X1
KO
K12892
serine/arginine-rich splicing factor 3
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03040
Spliceosome
otw05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112254812
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
112254812
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
otw03041
]
112254812
Spliceosome [BR:
otw03041
]
Common components
Common spliceosomal components
SR proteins
112254812
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
Motif
Other DBs
NCBI-GeneID:
112254812
NCBI-ProteinID:
XP_024283461
LinkDB
All DBs
Position
LG07:complement(52552738..52579558)
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AA seq
172 aa
AA seq
DB search
MGEPAHLRDCPLDCKVYVGNLGNSGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDP
RDATDAVRELDGRTLCGCRVRVELSNGEKRSRSRGPPPSWSRRTGREDYSSRRRGSPPVR
RRSPRRRSFSRSRSRSLSRDRRRERSISRDRNHKPSRSFSRSRSRSRTAERK
NT seq
519 nt
NT seq
+upstream
nt +downstream
nt
atgggagaacctgctcatctcagagattgtcctctggattgcaaggtgtatgtagggaat
ttgggcaacagtggaaacaagactgagttggagagggcgtttgggtactatggccctttg
cggagtgtgtgggtggccaggaaccccccaggctttgcctttgtcgagtttgaggatccc
agagatgcaactgatgctgtgagagaactggatggacggacgctgtgtggctgcagagtg
agagttgaattgtccaatggggagaaacgctcgaggagccgtggacctcctccctcctgg
agccgtcgcactggacgtgaagactacagcagcaggcgccgtgggagcccgcctgtcaga
cgccgctctcctaggaggaggagcttcagccgcagtcgcagcaggtctctgtcaagagac
cgaagaagagagaggtctatctccagagacaggaaccataaaccttcaagatccttctca
aggtctcggagccgctccaggaccgctgagagaaagtga
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