Oncorhynchus tshawytscha (Chinook salmon): 112254826
Help
Entry
112254826 CDS
T05605
Name
(RefSeq) SLIT-ROBO Rho GTPase-activating protein 3 isoform X1
KO
K07526
SLIT-ROBO Rho GTPase activating protein
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112254826
Membrane trafficking [BR:
otw04131
]
Endocytosis
Bin/Amphiphysin/Rvs (BAR) family proteins
F-BAR proteins
112254826
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
112254826
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
FCH
SH3_1
SH3_2
SH3_9
Flg_hook
FlaC_arch
Motif
Other DBs
NCBI-GeneID:
112254826
NCBI-ProteinID:
XP_042180546
LinkDB
All DBs
Position
LG07:complement(53020910..53085998)
Genome browser
AA seq
1144 aa
AA seq
DB search
MSSHTRVKKDKEIIGDYETQVKEIRNQLVEQFRCLEQQSESRLQLLQDLQDFFRRKAELQ
LEYSRGLDKLAERFSAKIRSSREHQHFKKDQNLLSTVNCWYLVLNQTRRESRDHATLSDL
YNNNVIVRLAHVGEDVIRLFKKSKEIGVQMHEELVKVTNELYTVMKTYHMYHTESISAES
KLKEAEKQGEKQIGKANDVSTSLLRHDDRQQRRSSVKKMEKMKEKRQAKYSENKLKCTKA
RNDYLLNLVATNALVAKYYIYDVSDMIDCCDLGYHASLARTLRTYLSAEYSLETSRHEGL
DQLEGAVDAMDVRGDKHRVMDMHSQIFCPPARFDYQPHMGDEVCQVSAQQPVQTELLMRH
HQLQSRLATLKIENEEVRKTLDATMQTLQDMLTVEDFDVSEAFQHSQSTESVKSASSDSY
MSKVNVARRRANQQETEGFYFTKFKEYLNGSNLIVKLQAKHDLLKQTLGEGERAEYGTTR
SCVSAHPSPTSSSTISPPTLPAKPRRMRKPRPCSVFNQKLFNGNMEAFIKDSGQAIPVVV
ESCVRYINLYGLQQQGIFRIPGSQVEVNDIKNSFERGEDPLVNDQSDHDIMAVAGVLKLY
FRGLENPLFPKEHFLDLMSTIKLDSGAERAHHLQQIVVTLSHPVIIVMRYLFAFLNHLSQ
YSDENMMDPYNLATCFGPTLMPIPDGHDPVACQTHVNEVIKTIIIHNEVIFPSHRELDGP
VYEKCMAGGEEYCDSPQSGPGAIDEVDNGTGPHTSDDELEQIEAIAKFDYVGRTPRELSF
KKGASLLLYLRASDDWWEGRHNGVDGLIPHQYIVVQDMEDAFSDSLSWKAESEASSGPHQ
EDRDRTSSRNRDRSSPCEHRQHTPEHHYGDALGRVRVRSDGAVIPHHRSTADTHSPTRGM
DMPPRVMPRPCSPHKMAVSRGRMDSPEKRHLSTFSSTGSINHPDRKCFRDGPALRPSPGS
TRHGSLGDQKSLAEDIEKTMNTALHELSELERQNVAKHAPDVVLDTLEPLKQQHLSSCGS
RPPSEPPGSPLHTNTMAIRDPDAALHRSSSSSSSETMSTFKPALTARRPSAPLRPPPVRP
LRPAPIHLGHGQGQGGQGQHRSSSSSSSGLGSPASITPTDRVFPKAPSPSPSTSSSSSDK
QGHM
NT seq
3435 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcccatacgagagtcaagaaggacaaggagattattggggattacgagactcaa
gtgaaagagatccgtaaccaattggtggagcagttccgttgtcttgaacagcagtcggaa
tcccggctacagctgctgcaggacctgcaggacttcttccgccgcaaggccgagctgcaa
ctggagtactctagaggcctggacaaactggctgagcgcttctccgccaagatacgctcc
tccagggaacaccagcactttaagaaggaccagaacctgctgtcgacagtgaactgctgg
tacctcgttctgaaccagacgaggagagagagcagagaccatgctaccctcagcgacctc
tacaacaataacgtcattgtccgcctagcacacgtcggagaggatgtcatcagactcttc
aagaagagcaaagaaatcggggtgcagatgcacgaggagttagtgaaagtcacgaacgag
ctctacactgtgatgaagacataccacatgtaccacacagagagcatcagtgcagagagc
aagttgaaggaggcggagaaacagggagaaaagcagatcggcaaggccaatgatgtcagc
accagcctcctgcgccatgacgaccgccaacagcgacgcagctccgtcaagaagatggag
aagatgaaggagaagagacaggccaagtactctgaaaacaagctgaagtgcactaaagca
cggaatgactatttgttgaacctggtggcaaccaatgctctggtggccaaatattacatc
tacgatgtctctgacatgatagactgctgtgacctgggctaccatgccagcctggcacgg
accctgaggacctacctgtctgcagagtacagcctggagacatcccgccatgaggggctg
gaccagctggagggtgccgtggatgccatggatgtcaggggggacaaacacagggtcatg
gacatgcacagccagatcttctgcccgcccgcccgcttcgactaccagccacacatgggc
gacgaggtgtgtcaggtgagtgcccagcagccggtgcagacagagctcctgatgcgtcac
caccagctccagtcccgcctggccacactcaagatcgagaacgaggaggtgaggaagact
ctggatgccaccatgcagacactgcaggacatgctgacggtggaggactttgatgtgtct
gaggctttccaacacagccagtccactgagtcggtcaagtctgcctcgtccgactcctac
atgagcaaagtcaacgttgctaggagacgagccaatcaacaggagaccgagggcttctac
ttcactaaattcaaagagtacctgaatggcagcaaccttatcgtgaaactacaggccaag
catgacctactgaagcagactctgggagaaggggaaagggctgaatatggaacaacacgt
tcatgtgtatctgcacacccttcaccaacctcctcctccaccatcagcccccccactctt
cccgctaaacccaggagaatgcggaagcctagaccttgctccgtttttaatcagaaactc
tttaacggcaatatggaggccttcatcaaggactcagggcaggctataccagtggtggtt
gagagctgtgtccgctacatcaatctatacggccttcagcagcaaggcatattcaggatt
cccggctcccaggtcgaagtcaacgatataaaaaattcatttgagagaggtgaggaccca
ttggtcaacgaccagagtgaccatgacatcatggcggtggcgggagttctgaagctgtac
ttcagggggctggagaacccactgttccccaaggaacacttcctcgacctcatgtctacc
atcaaactagactctggtgcagagagagctcatcaccttcagcagatcgttgtaactctt
tctcaccccgtcatcatcgtcatgagatatctgtttgcattcctcaaccatctatcccag
tacagtgatgagaacatgatggatccctataacctggctacctgcttcggcccgactctg
atgcccatacctgatggtcacgatcctgtagcctgtcagacacacgttaatgaggtcatc
aagaccatcatcatccacaacgaggtcatcttcccgagccaccgtgagctggacggaccg
gtctatgagaagtgcatggctggaggagaggagtactgtgacagtccccaaagtgggcca
ggtgccattgatgaagtggacaacggtacaggacctcacaccagtgatgatgaactggag
cagatcgaggccatcgctaagtttgactatgtggggcgtactcccagagagctgtccttt
aagaagggggcatcactgctgctgtacctgagagcctctgatgactggtgggagggacga
cacaacggagtggacggactcatcccacatcagtacattgtggtgcaggacatggaagat
gcgttctcagacagtctgagttggaaggctgagagtgaggccagtagtggaccccaccag
gaggacagagaccgaacctcatccaggaaccgtgaccgcagctccccctgcgaacacaga
caacatacccctgaacaccactatggagatgctcttggaagggtgagggttcgttcagac
ggtgctgttatccctcaccacaggagcaccgccgacactcacagccccacccgaggtatg
gacatgccccctagggtcatgccccgcccctgcagccctcacaagatggctgtcagcaga
ggccgcatggacagtccagagaaacgccatctcagcacgttcagcagcacaggaagtatc
aaccatccagatagaaagtgctttcgtgatggccctgccctcagaccctcccccggttcc
acccgccacggtagccttggcgaccagaaatcactggcagaggacatagagaagaccatg
aacaccgccctgcatgagctgtctgagcttgagcggcagaacgtggccaagcatgctccc
gacgtggtcctggacacgttggagcccctgaagcagcagcacctctcctcctgtgggtcc
agacccccctctgagccccctggcagccccctccacaccaacaccatggccatcagagac
cctgacgccgcccttcaccgtagcagcagttcctcgtcctccgagaccatgagcaccttc
aaaccggccctgactgcacggaggcccagcgcccccctcaggccgcctccggtcagaccg
cttcggcctgctcccatccacctgggacatggccagggacaggggggacaggggcagcac
aggtctagtagttccagctcctcaggcctgggaagtccagcatctatcactcccacagat
agggtgttccccaaggctccatccccgtccccctccacttcctcctcgtcctcagacaaa
cagggtcacatgtag
DBGET
integrated database retrieval system
