KEGG   Oncorhynchus tshawytscha (Chinook salmon): 112254836
Entry
112254836         CDS       T05605                                 
Symbol
rrp9
Name
(RefSeq) U3 small nucleolar RNA-interacting protein 2
  KO
K14793  ribosomal RNA-processing protein 9
Organism
otw  Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:otw00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:otw03009]
    112254836 (rrp9)
Ribosome biogenesis [BR:otw03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    112254836 (rrp9)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_TEP1_2nd WD40_CDC20-Fz Beta-prop_EML_2 EIF3I WDR55 Beta-prop_EML Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd NBCH_WD40 Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd Beta-prop_IFT122_1st WD40_MABP1-WDR62_1st ANAPC4_WD40 WDR90_beta-prop_4th Beta-prop_IP5PC_F Beta-prop_SCAP Beta-prop_DCAF4 Beta-prop_SPT8 Beta-prop_Vps41 Beta-prop_HPS5 Beta-prop_IFT140_1st PEP5_VPS11_N Beta-prop_DCAF12 Beta-prop_WDR75_2nd WD_LRWD1 Beta-prop_WDR19_1st WDR54 WD40_like Beta-prop_BBS7 LAIKA
Other DBs
NCBI-GeneID: 112254836
NCBI-ProteinID: XP_024283504
LinkDB
Position
LG07:54068630..54073335
AA seq 482 aa
MSSFFIKKKGPPKDFKKSENSAGSKRKNDGDTGNKLKKKLNSKHNEEISSDSETEGPAVH
RKRRANVEEEFDETPQEKKLRLAKLYLDQLRDEEEKKAEEESFETDLIAGRLQEEVLEQK
GKLQRMVAKDLLPPDTSEIRLLRGHKLPVTCLVISPDDKHIFSAAKDCSIIKWDVENGKR
LHTIAGGRKGTEDRHVGHTAHVLCISISSDGKYLATGDMNKLIMIWEAATCKHLYKFTGH
RGPVSGLSFRRGTHDLYSASHDRSIKVWNVDENAYVETLFGHQDVITGLDSGSRERCVTA
GGRDRTVRVWKIAEESQLVFHGHEGSIDCIQLINEEHMITGADDGSVSLWSVNKKKPLST
VKAAHGRHGDSGLEQPYWVAAVAALQNSDTVASGSHNSKVQLWKCGQGFRHLEPLFSIPV
PGFVNSLKFSSSGKFLVAGVGQEHRLGRWWRLKEAKNGLYIIPLKRQQPEQERVQNGEEN
GV
NT seq 1449 nt   +upstreamnt  +downstreamnt
atgtcgtctttcttcataaagaaaaaaggacctccaaaggatttcaaaaagagcgagaat
tcagcgggttccaaacgaaagaatgatggagacacgggaaacaaactcaagaagaagctc
aattcaaagcacaatgaagaaatctccagcgactctgaaactgaaggccctgcagtgcac
agaaaaaggagggccaatgtcgaagaagagtttgatgagactccacaggaaaagaaacta
cgattggccaagctctaccttgaccaattgagggatgaggaagaaaagaaagcagaggaa
gagtcgtttgagactgacctgatagctggaagacttcaagaagaagtgcttgaacagaaa
ggaaagcttcaacggatggttgcaaaagatctcctgccaccagacacgtcagagattcgt
ctgttgagaggccacaagctgccagtcacctgtctggtcatctctcctgatgacaagcac
atcttctctgctgccaaagactgctccatcatcaaatgggatgtagagaatggtaagaga
ctgcacacaatagctggtgggaggaaaggaacagaggatcgccatgttggacatacagcc
catgtcctgtgtatctccatatcgtcggacggcaagtacctggcaacgggagacatgaat
aagttgatcatgatttgggaggcggcaacatgtaaacacctgtacaagttcacaggacat
agaggccctgtgtcgggcctgtccttcaggaggggcacccatgacctgtacagtgcctct
cacgaccgctccatcaaggtgtggaacgtggacgaaaacgcctatgtggaaaccctattt
ggtcaccaggatgtgatcacggggctggacagtgggagtcgggagcgctgtgtgactgca
ggggggagggaccgcactgtgagggtgtggaagattgctgaggagtcccagctagtgttc
catggccatgagggctccatcgactgcatccagctcattaacgaagaacacatgataaca
ggtgctgatgatggttccgtctccctctggagtgtgaacaagaagaagccactcagcacg
gtgaaggcagcccacggtcggcatggtgactcggggctggagcagccctactgggtggca
gccgtggcggctctgcagaactctgacaccgtagcctcaggttcacacaactctaaggtg
cagctgtggaagtgtggccaggggttccgtcacctggagcctctcttcagcatccctgtg
cctggttttgtcaacagtctgaagttctccagctctgggaagttcctagtggcaggagta
ggacaggagcacaggcttggtcggtggtggagactgaaggaagcaaagaacggactctac
attattcctctgaaaagacaacagccagagcaggaaagggtccagaatggagaagagaat
ggggtttag

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