Oncorhynchus tshawytscha (Chinook salmon): 112254873
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Entry
112254873 CDS
T05605
Symbol
lamb3
Name
(RefSeq) laminin subunit beta-3
KO
K06244
laminin, beta 3
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04382
Cornified envelope formation
otw04510
Focal adhesion
otw04512
ECM-receptor interaction
otw04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
112254873 (lamb3)
04518 Integrin signaling
112254873 (lamb3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
112254873 (lamb3)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
112254873 (lamb3)
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Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_laminin
Laminin_N
EGF_LMN_ATRN
LAMB1
KASH_CCD
GldM_1st
CCDC39
CCDC18_1st
Prominin
GEMI5_RBS
APG6_N
DUF7121
COG4_N
CEP131_C
DUF745
CEP135_TSGA10_CC
SPC25_N
Motif
Other DBs
NCBI-GeneID:
112254873
NCBI-ProteinID:
XP_024283569
UniProt:
A0A8C8HWX9
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All DBs
Position
LG07:complement(56275567..56293322)
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AA seq
1162 aa
AA seq
DB search
MWILFQLAALTAVAATQRDCSRGACYPPMGDLLLGRDRQLHASSTCGLTGSEVFCTPFGQ
SKMKCCPCDSRNPSSQLAHTIQDVLSTAGPNRWWQARKDVSPVTVQLDLQNLFQLDTLIL
TFKGPRPSSLVVERTLDNGKTWQPALYMASDCRSAFPGIAMITPRSLDQTYCYTLPPATT
NPYQDQTIQFSPLRQFSTISVPNGQKIQEVSGLSGLRVRMTNLGAVPRLPGRAPSLFYAL
REMRVMGTCLCHGHANRCLPDTNQLPNTQVSAQCECQHNTAGINCERCADLYNDLPWRPA
EEGDTHTCKRCECNNHSQRCRFDPDVYESSGRRSGGMCESCLHHTTGPKCDRCAPGYQPN
HRSSMDRPDACIRCHCSAEGVENGDQCDDVTGSCRCKANVDGSQCDRCKMGYYGLTASNP
LGCNKCLCSKEGSLSSVCDPVSGQCPCQPHLQGLTCELCSHGYWNPSSPRGCEPCRCDPT
NSHGDTCDQSTGQCQCRSGFGGRTCTECPDNTYGDPLIGCRSCQCAAGGTKPGGCDKCTG
ACRCRLGVTGARCDACTRGHCDSFPDCEVCPSCFFSLDSNIQNLTLGLERLSSRIPSLPG
GSLPTSLGPRIRTLEATLTQIRDSLPLPPPSARQVNDALSQLRRLRVQLDQVDGDLSPQG
RAPELDTQLDELQALLDGLGLVYNTKRDALRNSVNSNNAGAFSSIKDAYDASTDSAKSVD
ASGKTVDQSKAVRKDAIDLQNQVQPANTRDLEKLNHQLNTKPDLTPTAKQVCGSVRFAPC
TPAQCDGELCPAEGAPPCGRGESCVGALPLGTRAVRDAEEVKDRLKQLNGKITQAAAQIQ
ETQDTANKVRQSTDNLDNQMRRARDDLDADLQETRDFVKELKDFLSDPSSDPTHISTVSE
WILNAKLPVSLATLKRKLQEIRDLAAGLPDSTAVLVQAGPQLDIARRLLQEARDARDAAL
GVKADVDGLLEGFTTVEGSLSGLEEKVQESLDIVDDISSNLTQTKAQLSPVVKALGEVSA
LAEGMKPQLEGLRALVRSGDMLAQNATEEADKAKREADAAAKELASLEKQLEQLRAAERT
SGRGDGTGTAGARLQKLQEEAGSLAQDTGDMIKALAGKADSLRSLQDEVLLKSQRLTGLE
AKLLDLLADMRQKVTIFSTCQG
NT seq
3489 nt
NT seq
+upstream
nt +downstream
nt
atgtggattttattccagctagcagccctgactgcagtggctgcgacacagagggactgt
tctcggggggcctgttacccccctatgggagacctgctcctcggtagggaccgtcagctc
cacgcctcctccacctgcggcctcaccggctcggaggtcttttgcacccccttcggacag
tcgaagatgaagtgttgtccctgtgactccaggaacccatccagtcagttggctcacacc
atccaggatgttctatccactgctggccccaacaggtggtggcaggccaggaaagacgtg
agtccggtcaccgtacagttggacctacagaacctgtttcagctggacaccctcattctg
acattcaagggtcctcgtcccagctcgctggtggtggagaggacgctggataacggtaaa
acatggcaacctgctctctacatggcctccgactgcagatcggccttccctggcattgcc
atgattacgccacgttccctggaccagacgtattgttacactctgccccccgccaccact
aacccctaccaggaccagacgattcaattcagtcccttgcgtcagttctctaccatcagc
gtccccaatgggcagaagattcaagaggtatcaggattgtcaggcctgcgagtgaggatg
actaatctgggtgctgtgccccgcctgccgggccgcgctccctctctgttctacgccctc
agagagatgagagtgatgggcacctgcctctgccacggccatgccaaccggtgtctgcca
gatactaaccagctacctaacacacaggtcagtgctcagtgtgaatgccaacacaacaca
gcgggtataaactgtgagcgctgtgcagatctttacaacgacctgccctggagacctgca
gaggagggggacacacatacctgcaaacgttgtgagtgtaacaaccattcccagcggtgc
cgtttcgacccagatgtgtatgagtcgagcggacggaggagtgggggtatgtgtgagagc
tgtcttcaccacacgactggacccaagtgtgaccgctgtgcccctggataccaacccaat
caccggagcagcatggaccggcctgatgcctgcatacgctgtcattgcagtgctgagggg
gtggagaatggggatcagtgtgatgacgtcacagggtcctgtcgctgtaaggccaatgtt
gatggatcgcaatgtgaccgctgcaagatgggatactacggtctgaccgcctccaaccct
ctgggctgcaacaagtgcctgtgcagtaaagagggatccctgtccagtgtgtgtgaccct
gtgagtggtcagtgtccttgccaacctcatctccaggggctgacctgtgagctgtgttcc
catggttactggaatccatcctctccccgtggttgtgagccctgtcgctgtgaccccacc
aactcccacggcgacacctgtgaccagagtacgggtcagtgccagtgcaggtcagggttc
ggaggtcgtacctgtacagaatgtcctgacaacacctacggagacccactcattggctgc
agatcgtgtcagtgtgctgctgggggcacaaagccaggaggctgtgataagtgtacggga
gcctgccggtgccggctgggtgtcacaggtgcccgttgcgatgcctgtacccgtggccac
tgtgactccttccctgactgtgaggtctgcccctcctgctttttctctctggactcaaac
atccagaacctcaccctgggcctggagagactctcctccaggattccctctcttcctggg
ggctcgttacctaccagtctgggtccccgcatcagaaccctggaggccactctcacccag
atacgagactctctcccactgccacctccctctgccagacaagtcaacgatgccctctct
cagctccgcaggctaagggtccagttggatcaggtggatggagatttgtcaccccaaggt
cgagcccctgagctagacacgcagctggacgaactccaggctctactggacggcctgggt
ctggtgtacaacaccaagagagatgctctcaggaactctgtcaactccaacaatgcaggg
gccttttcttccataaaggatgcctatgacgcgtcaactgactctgccaaaagtgttgat
gctagtgggaagactgtagaccagtcaaaagcagtcagaaaagatgccattgacctccag
aaccaggtccaaccagccaacaccagagacctggagaaactcaaccaccagctgaacacc
aaacctgacctcacacccactgccaagcaggtgtgtggcagcgtgcgctttgccccctgt
acccctgctcagtgtgatggtgagctgtgccctgcagagggggcgcccccctgtggccgt
ggagagagttgcgtcggggctctgcctctggggacccgggctgtgagagatgctgaggag
gtgaaagacagactgaaacagctcaatgggaagatcacacaggccgctgcacagatccag
gaaacacaggacacagccaataaggtcagacagtccacagacaatctggacaatcagatg
aggcgggccagggatgacctggatgcagatctgcaggagacgagagactttgttaaagag
ctgaaggacttcctgtcagacccatcatcagacccgacacacatcagcacagtgagtgag
tggatcctgaatgccaagctgcctgtcagtctggcaactctgaagaggaagctccaggag
atcagagacctggcggcaggactcccagacagcactgcggtcttggtccaggctggacca
cagctcgacatcgcccggcgcctgctacaggaggcccgggacgccagggacgcagcgctg
ggtgtgaaggctgatgttgacgggctgttggagggcttcactacagtggagggctccctc
tctggcctggaggaaaaagtgcaggagagcctggacatagtggatgacatcagcagcaac
ctcacacagaccaaggcccagttgtctccagtggtgaaggcgctaggggaggtgtctgcc
ctggctgaggggatgaagcctcagctggagggactcagggctctggtgcgctctggagat
atgctggcccagaatgcaacagaagaggccgataaagctaagagggaggcagacgctgcg
gccaaggagctggcatccctggagaagcagctggagcagctgcgtgctgcagagaggacc
agtgggcgtggcgatgggacggggacagcaggggctcgtctccagaaactgcaggaggag
gctggttctctggcccaggacactggagacatgataaaggcactagcaggtaaagcagac
tctctgcgtagtctacaggatgaggtcctactgaagtcccagaggctgactggcctggaa
gccaaactgctggaccttctggctgacatgagacagaaggtcacgatcttctccacctgc
cagggctga
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integrated database retrieval system
