KEGG   Oncorhynchus tshawytscha (Chinook salmon): 112254944
Entry
112254944         CDS       T05605                                 
Name
(RefSeq) WD repeat-containing protein 1
  KO
K24736  WD repeat-containing protein 1 (actin-interacting protein 1)
Organism
otw  Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:otw00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:otw04990]
    112254944
Domain-containing proteins not elsewhere classified [BR:otw04990]
 Other domain-containing proteins
  WD40 repeat (WDR) domain-containing proteins
   112254944
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_WDR5 WD40 Beta-prop_WDR3_1st WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_TEP1_2nd WDR55 Beta-prop_CAF1B_HIR1 Beta-prop_WDR3_2nd EIF3I Beta-prop_WDR36-Utp21_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_EML WD40_MABP1-WDR62_2nd WD40_Gbeta ANAPC4_WD40 Beta-prop_RIG_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_WDR19_1st Beta-prop_WDR41 Beta-prop_IFT140_1st Beta-prop_WDR75_1st Beta-prop_Aladin WD40_MABP1-WDR62_1st Beta-prop_IFT122_1st Beta-prop_TEP1_C eIF2A Beta-prop_HPS5 Beta-prop_Vps41 Beta-prop_WDR35_TULP_N Beta-prop_VPS8 Beta-prop_EIPR1 PEP5_VPS11_N NBCH_WD40 Tricorn_2nd RMC1_N Beta-prop_NUP159_NUP214 Beta-prop_SCAP Beta-prop_RIG_1st Beta-prop_ACSF4 PROPPIN WD40_like Beta-prop_ELP1_1st Beta-prop_WDR11_1st DUF5711 DUF7165 Beta-prop_DCAF12 WD40_RFWD3 HPS3_N
Other DBs
NCBI-GeneID: 112254944
NCBI-ProteinID: XP_024283703
LinkDB
Position
LG07:58443058..58463692
AA seq 606 aa
MTYDLKHVFASLPQMERGVAKVLGGDPKGNNFLYTNGKSVIIRNMDNPAIADIYTEHPHQ
VTVAKYAPSGFYIASGDVSGKIRIWDTTQKEHLLKYEYQPFGGKIKDIAWTEDSKRIACV
GEGREKFGAVFLWDTGSSVGEISGHSKIINSVDIKQTRPYRLITGSDDNCGAFFEGPPFK
FKFSSTDHSRFVNCVRFSPDGNRFCTAGADGQIFLYDGKTGEKLGALGGAKAHEGGVYAV
SWSPDSSQLISASGDKTVKLWDVGTSMALTTFNMGADVMDQQLGCLWQKDHLLSISLSGY
INYLDKSNPDRPLRTIKGHSKSIQSLTVHKNKGRAYIYSGSHDGHINYWDAETGENNCFS
GKGHSNLVTKMVVDEADQLVTCSMDDTVRFTSVTKKEYSASNLVKMDVQPKHVSVATGGL
TLAVCIGQVVLLKDQKKVFMLDSLDYEPEAGAIHPGGSTAAVGGADGKVHLYSVQGNTLK
DEGKSMEAKGPVTDMAYSKDGAYLAVTDEKKVVTVFTVADDYAVKNDFYGHHAKVVTLAW
SPDNEHFASGGMDMIVYVWTVNDADKRLKIPDAHRLHHVSGLAWIDEHTLVTTSHDASIK
QWTLKF
NT seq 1821 nt   +upstreamnt  +downstreamnt
atgacctatgatttgaagcatgtatttgccagcctcccgcagatggagcgaggagttgcc
aaagtccttggtggagatcccaaaggcaacaacttcctctacaccaatgggaagagtgtc
atcatcaggaacatggataaccctgccatagctgacatctacaccgagcaccctcatcaa
gttactgttgccaagtatgctcccagtggcttctacattgcgtctggagatgtgtctggt
aagatccgtatctgggacactacccagaaggagcaccttctgaagtacgagtaccagcct
tttgggggaaaaatcaaggacatcgcctggactgaggacagcaaaaggattgcttgtgtg
ggagagggacgtgagaagtttggggctgtgttcctgtgggacactggctcctcagtgggt
gagatctcgggccactccaaaatcatcaacagcgtggacatcaagcagactcgcccctac
cgcctcatcaccggcagtgatgacaactgtggggccttctttgagggaccccctttcaag
ttcaagttctcaagcacagaccacagccggtttgtcaactgcgtgcgtttctctccagac
gggaaccgcttctgtacggctggcgctgacggtcagatctttctatacgacggaaagact
ggcgagaagcttggggctctgggcggagcgaaggcccacgaaggaggagtctatgccgta
agctggagccctgacagctcccagctcatctctgcctcgggtgacaagactgtgaagctg
tgggatgtgggcaccagcatggccctcaccaccttcaacatgggtgccgacgtcatggac
cagcagctgggctgcctgtggcagaaggaccacctgctcagcatatccctgtcgggctac
ataaactacctggataagagcaaccccgaccggccgctccgcaccatcaagggtcacagc
aaatccattcagtccttgactgttcacaaaaacaaggggagggcttacatctactctggc
agccatgacgggcacatcaattactgggatgccgagaccggggagaacaactgcttctca
gggaagggccacagcaaccttgtcaccaagatggtggtggacgaggccgaccagctggtg
acttgcagcatggatgacacggtccgcttcaccagcgtgacaaagaaagaatacagtgct
tccaacctggtaaagatggacgtccagcctaaacatgtttccgtagcaacaggggggctc
acattggccgtgtgcattggacaggtggtgttgctgaaggaccagaagaaggtgttcatg
ctggacagtctggactacgagcctgaagcaggagccatccacccaggaggcagcactgcg
gcagtgggcggcgcagatgggaaggtccacttgtattctgtccaaggcaacactctgaag
gatgaggggaagagcatggaggccaaagggccagtcacagacatggcctactccaaagac
ggagcctacctggccgtcactgatgagaagaaggtcgtcacagttttcaccgtggcggat
gattacgcggtcaaaaatgatttttatggacaccacgctaaagtagttaccttggcctgg
tcccccgacaatgagcactttgccagcggtggaatggacatgattgtctacgtttggaca
gtgaatgatgcagataagaggctgaagatcccagatgcccacaggttgcaccatgtcagt
ggcctggcctggatagatgaacacacgctagtgaccacctctcatgacgccagcatcaag
cagtggactcttaaattctga

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