Oncorhynchus tshawytscha (Chinook salmon): 112254951
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Entry
112254951 CDS
T05605
Name
(RefSeq) syntaxin-18 isoform X1
KO
K08492
syntaxin 18
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04130
SNARE interactions in vesicular transport
otw04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
112254951
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
112254951
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112254951
Membrane trafficking [BR:
otw04131
]
SNARE
Syntaxin (Qa)
Stx-rER
112254951
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin-18_N
SNARE
DUF6331
ACR_tran
DUF4559
Motif
Other DBs
NCBI-GeneID:
112254951
NCBI-ProteinID:
XP_024283717
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Position
LG07:complement(58904642..58935044)
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AA seq
331 aa
AA seq
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MAVDITLLFKASVKTVKTRNKAMGVVFDSPKDEIFKKSRPNNGFSLKAKEVISNITKLKD
FLLQHRKDYVNAGSLISSDLTRMTDNERDQIDQDAQIFMRTCSEAIKQLRSEAEKRVIST
QIKEHRGAVLDLIEMYLKGVCKLYSEQRAIRVKRVVDKKRLSRLEPEHHHSRMVVEKSPQ
VEQHSEEKTSKEESSSGERSVMEVPDNTVSLWEEGQGRVDDELSPEEMQMFEQENQRLVS
EMSNLVDEVRQIEGKVVEISRLQEIFAEKVLMQETEIDNIHQLVVGATENVKEGNEDIRE
AIQNNAGFRVWILFFLVMCSFSLLFLDWYDS
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atggctgttgatataactttattgttcaaagccagtgtaaaaacggtcaaaacccgaaat
aaagctatgggagtagtgtttgattcgcctaaagatgaaatattcaagaagagcagaccg
aataacggattttctctcaaggcgaaagaagtgatttctaacatcaccaagctgaaagac
tttctactgcagcacaggaaagactatgtgaatgctggaagtctcatctcatcagatcta
acccggatgacagacaatgagcgagaccagatcgaccaggacgcccagatcttcatgaga
acctgctctgaagccatcaagcagctccgctctgaagctgagaaacgggtcatatcaacc
cagattaaagagcacaggggggcggtcctcgacctaatcgagatgtatttgaaaggagta
tgcaagctttattccgagcagagggctatacgagtgaagagagtggtagacaagaagaga
ctgtcccgactagagccagagcaccaccacagtaggatggtggtggagaagagcccacag
gtggaacagcacagcgaggagaaaacatccaaggaggagagcagcagcggtgagcggagc
gtgatggaggtcccggataacactgtgagcctgtgggaggagggccagggtcgtgtggat
gacgagctctcacctgaggagatgcagatgtttgaacaggagaaccagaggctggtgagt
gagatgagcaacctagtagatgaagtcaggcaaatcgaaggcaaggttgtcgaaatctca
cgtctccaggagatttttgcggagaaggtgctaatgcaagaaactgagatagacaatatc
catcagctagtcgtgggagccactgaaaacgtcaaagagggaaacgaggacatccgagag
gccatccaaaacaatgctggattccgtgtctggattctcttcttcctcgtcatgtgctcc
ttctctctgctcttcctggattggtatgacagctaa
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