Oncorhynchus tshawytscha (Chinook salmon): 112255023
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Entry
112255023 CDS
T05605
Name
(RefSeq) alpha-1-syntrophin
KO
K24063
alpha-syntrophin
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
112255023
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GFIT
Motif
Pfam:
Syntrophin_4th
PH_17
PDZ
PH
PDZ_6
SOS1_NGEF_PH
PDZ_2
Motif
Other DBs
NCBI-GeneID:
112255023
NCBI-ProteinID:
XP_024283822
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All DBs
Position
LG07:complement(63112840..63179995)
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AA seq
486 aa
AA seq
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MAAAMKAQKTGLLELRVTVDRWIRVLATLTEETLTVSPGEVAEEPVKPNPTPAGDINGDP
ANLSSFPVPETITNVKRTVRVTKQDVGGLGISIKGGKENKMPILISKIFKGLAADQTEAL
YVGDAILSVNGSDLREATHDDAVQALKKTGKEVILEVKYIKEMSAFFKNTLPGAPLPWDS
PHATPQKGADVLPTELKEARTIPLKMCQVTRKQCPPDTENRYFEVISSSRKSSVFLRAKD
PAMAQSWYNAIQAGVSALVPRVRDELRAMQAGLEVKHMGWITEQATQGPERPVLALLTER
DLLLYPTLPDSKDGINSPAKSHPLITTRLVHSGPGKSSPLLDSELSFGLRTGTKQGVETH
LFRVDSAKELSAWTHMLVDGCHNAAELIQEVTTACSWNGKECNLGVHIDEGFSLFTEEMG
IRKTVLLQQPFERLRMSSDDGVHMIFLDFGGPEAEIQLDLHSCPKTMVFIIHSFLSAKVK
RLGLLA
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atggctgccgcgatgaaggcacagaaaactggactgttggaacttcgagttaccgtggac
cgttggatccgtgtattagccacacttacggaggagactttaaccgtgagccccggagag
gtcgccgaagaaccagtgaaacccaacccaactcccgccggtgacattaatggagaccca
gccaacctcagctcctttcccgtcccagaaacgatcaccaacgttaagcgcacggtgaga
gttacaaagcaagatgtgggaggacttggaattagtattaaaggtgggaaagagaataaa
atgcctattctcatctcgaagatcttcaaagggttggctgctgaccagacggaggccctg
tacgtgggtgacgccatcctttcggtcaacggctctgacctccgggaggccacacacgat
gatgccgtgcaggctctaaagaagacgggcaaggaggtcatcctagaggtgaaatacatc
aaggagatgtcagccttctttaagaacaccttgcccggtgcacccctaccctgggactcc
cctcatgccacgccacagaagggcgcagacgtcctccctactgagctgaaggaggccagg
accatccccctgaaaatgtgccaggtgaccaggaagcagtgccccccggacacagagaac
aggtactttgaggtgatctcgtccagcagaaagagctcggtgttcttgagggccaaggac
cctgccatggcccagtcctggtataacgccatccaagccggggtttcggccctggtgccc
cgagtcagggatgagctgagggccatgcaggcgggcctggaggtcaaacacatgggatgg
atcactgagcaggcgacccagggtccagagagaccggtgctggctctgctgactgagaga
gacctgctgctgtaccccacccttcctgacagtaaagacggcatcaacagcccagccaag
agccacccgctcatcacaactagactggtccactcaggaccggggaaaagctctcccctg
ttggactcggagctctcctttgggctgcgcaccggcaccaagcagggcgtggagacccac
ttgttccgggtggactcggccaaggagctttcagcctggacccacatgctggtggacggc
tgccacaatgctgccgagctcatccaggaggtcaccacagcctgcagctggaacgggaag
gagtgcaacctgggagtgcacatcgacgagggctttagcctgttcactgaggagatgggc
atcagaaaaacggtgctcctccagcaacccttcgagcgcctgcgcatgtcctccgatgac
ggtgtacacatgatcttcctcgactttggagggccagaggcggagattcaactggacctc
cactcctgccccaagaccatggtgttcattatccactccttcctctctgctaaggtcaag
cggctaggcctgttagcatga
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