Oncorhynchus tshawytscha (Chinook salmon): 112255029
Help
Entry
112255029 CDS
T05605
Symbol
tfap2c
Name
(RefSeq) transcription factor AP-2 gamma isoform X1
KO
K09177
transcription factor AP-2 gamma
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112255029 (tfap2c)
Transcription factors [BR:
otw03000
]
Eukaryotic type
Other basic domains
AP-2 (bHSH)
112255029 (tfap2c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TF_AP-2
4PPT_N
Motif
Other DBs
NCBI-GeneID:
112255029
NCBI-ProteinID:
XP_024283832
LinkDB
All DBs
Position
LG07:63714036..63733360
Genome browser
AA seq
473 aa
AA seq
DB search
MLWKLADNVKYEDDCEERHDGSSNGNPRLPHLPAVSQHIYSPSPSLSHSANSDFQPPYFP
PPYQPISYPQSSDPYSHLGDPFNINSIHQSSSNQQQSWPGRHGQEGLGPHSRSGLASQIL
GLDGGSSGLRREGFRRPELLPPHAHSIESTIIGDNIGLHEMGHGLDDVQHVDDHSIIMAD
QTVIKKVLGLRGGRNLDRLQRTYYEGGILAGEDEGPLSLPKGNSLGLPFQKESLLGMVSN
PTEVFCSVPGRLSLLSSTSKYKVTVAEVQRRLSPPECLNASLLGGVLRRAKSKNGGRSLR
EKLDKIGLNLPAGRRKAANVTLLTALVEGEAVHLARDFGYSCETEFPAKAIAEYLGRPHV
ERNEVNSRKNMLLAAKQICKEFTDLLTQDRSPLGNTRPAPILDQGIQGCLTHFSLITHGF
GSPAICAAMTSLQNYLNEALKQVDKMYLSSGSDTQGSSDNGSKASDKMEKHRK
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgctgtggaaactagcagataacgtgaagtacgaggatgactgtgaggaaaggcacgac
gggagtagcaatgggaacccccgcttacctcacctccccgcagtgagccagcacatttac
agcccgtcgccgtccctctcccactccgccaactcagacttccaacccccgtacttccca
cctccataccagcctatatcatacccccagtccagtgacccctactcgcacctcggcgac
cctttcaacatcaactccatacaccagtcgtcctctaaccaacagcagtcatggccgggg
cgacatggtcaagaaggactgggacctcattcgcgaagcggactcgcgagccagattctg
ggcctggacggcggctcgtccggcttgagaagagaaggcttccgtcggccagagctgtta
ccgcctcacgcccatagcattgagtcaaccatcattggtgataacataggactgcatgaa
atgggccatggcctggatgatgttcaacatgtagatgaccacagtattataatggcagat
cagacagtcatcaaaaaagtactaggactacgagggggcagaaaccttgatcgcttacag
aggacttattatgaggggggcattcttgcgggtgaggatgaaggccccttgtccctcccc
aagggcaactcattgggcctgcccttccagaaggagtccctgttaggcatggtgtccaac
cccaccgaggtgttctgctcagtgcctggacgtctctcacttctcagctccacctccaag
tacaaggtgactgtggcagaggtgcaacggcgtctgtctcctcccgaatgcctcaacgcc
tctttgctagggggagtcctacgtagagccaagtctaaaaatggtggccggtcattgaga
gagaagctggacaagattgggctcaacctgcccgctggaaggagaaaggctgctaacgtc
accctgttaactgcactggtagaaggagaagctgttcacttagcaagggattttggctac
tcgtgtgagacagagttcccggcaaaggccatcgctgaataccttggtcgaccacacgtg
gaacgtaatgaggtcaactcccgcaagaacatgctccttgctgctaagcaaatctgtaaa
gagttcaccgatctgctgactcaggaccgttcgcctctggggaacacgcggccggcgccc
atcctggatcagggcatccagggctgcctgacccacttcagcctcatcacccacggcttc
ggctcgccagccatctgcgccgccatgacctccctccagaactacctgaatgaggccctc
aaacaggtggacaaaatgtacctgagctcgggcagcgacacgcagggctcctccgacaac
ggtagcaaagcctctgacaaaatggagaagcacaggaaatga
DBGET
integrated database retrieval system
