Oncorhynchus tshawytscha (Chinook salmon): 112255114
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Entry
112255114 CDS
T05605
Symbol
pparg
Name
(RefSeq) peroxisome proliferator-activated receptor gamma isoform X1
KO
K08530
peroxisome proliferator-activated receptor gamma
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03320
PPAR signaling pathway
otw04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
112255114 (pparg)
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
112255114 (pparg)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112255114 (pparg)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
otw03310
]
112255114 (pparg)
Transcription factors [BR:
otw03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
112255114 (pparg)
Nuclear receptors [BR:
otw03310
]
1. Thyroid hormone like
1C. Peroxisome proliferator-activated receptor (PPAR)
112255114 (pparg)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
PPARgamma_N
Hormone_recep
Gly-zipper_YMGG
Motif
Other DBs
NCBI-GeneID:
112255114
NCBI-ProteinID:
XP_042162047
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All DBs
Position
LG25:complement(20932413..21079084)
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AA seq
620 aa
AA seq
DB search
MHMMCSNFNKQRPRCDTDMVDTQLLAWPMGISLTPVHLDELDDSSHSLDMKPFTTLDYTS
LDYEHGPTISSYRPTQVHHYQASHSPRPTQAHHYQDSHSPRPTQAHHYQASNSPRPTQAH
HYQASYSPSHLSPRPGQGYQPCPSPGSSPALGHHLAYMDHMYNHSQVQEGHGETCCIKLE
PESPPQHSDSSPLYSKLQDDTTASLLNIECRVCGDKASGFHYGVHACEGCKGFFRRTIRL
KLVYDHCDLHCRIHKKSRNKCQYCRFQKCLVVGMSHNAIRFGRMPQAEKEKLLAEFSTDM
DIMHPEAADLRSLAKLLLESYLKYFPLTKAKARAILSGKTGDNAPFVIHDMKSLQEGERF
INCRQMPIHVVQETRTEAGTEAGTGAGCGLGGCLAVSEGLAVGGGLGGGVGLVQEPTDEV
QLRFFYSCQSRSAEAVREVTEFAKSIPGFVGLDLNDQVTLLKYGVIEVLIIMWAPLMNKD
GTLISYGQIFMTREFLKSLRKPFCDMMEPKFEFSVKFNTLELYDSDMALFLAVIILSGDR
PGLLNVKPIEELQETVLHSLELQLKLNHPDSLQLFAKVLQKMTDLRQIVTDHVHLIQLLK
KTEVDMCLHPLLQEIMRDLY
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atgcatatgatgtgtagcaattttaacaagcaacgtcctcgctgtgatacagacatggtg
gatacccagctcctcgcatggccaatgggcatcagtctgacccctgtacacctggatgag
cttgatgacagttctcactctctggatatgaaaccattcaccaccctggactacactagc
ctggactacgaacacggacccaccatctccagctacagacccacccaggtccaccactac
caagcaagccacagtcccagacccacccaggcccaccactaccaagacagccacagcccc
agacccacccaggcccaccactaccaagccagcaacagtcccagacccacccaggcccac
cactaccaagccagctacagccccagtcacctcagccctagacctggccagggttaccag
ccctgccccagccctggctccagccctgccctgggacaccaccttgcatacatggaccac
atgtacaaccacagccaggttcaggaaggacacggtgagacctgttgtataaaactggag
ccagagtctcctccccagcactcagacagcagtcctctctactccaagctacaggacgac
accaccgcttccctactcaacatagagtgtcgagtctgtggagacaaagcttctggcttc
cactacggagtccatgcctgtgaaggctgcaaggggttcttccgtcggaccatccggttg
aagctggtttatgaccactgtgacctgcactgtcgcatccacaagaagagccgcaacaag
tgtcagtactgtcgctttcagaagtgcctggtggtgggcatgtctcacaatgccattcgt
tttggacggatgccccaggctgagaaggagaagctcctagctgagttctctactgacatg
gacatcatgcaccctgaggctgccgacctgaggagcctggccaagctgctgctggagtcc
tatctcaaatacttccccctcactaaggccaaggccagggccatcctgtctggaaagact
ggggataacgcgccgtttgtaatccatgacatgaagtctcttcaggaaggagagaggttt
atcaactgcaggcagatgcccatccatgttgtccaggagaccaggactgaggcggggact
gaggctgggactggagctggctgtggtctaggtggatgtctggcagtgagtgaaggtctg
gctgtaggtggaggtctaggtggaggtgttggtctggtccaagagcccactgacgaggtg
cagctcaggttcttctacagctgtcagtcgcgctccgccgaggccgtccgagaggtcaca
gagttcgctaagagcatccctggcttcgtgggattggacctgaacgatcaggtgactctg
ctgaagtacggcgtcatcgaggtgctcatcatcatgtgggctccactcatgaacaaagat
ggtacactgatctcctatggacagatcttcatgacgagagagttcctaaagagcctgagg
aaacccttctgtgatatgatggaacccaagtttgagttctctgttaagttcaacaccctg
gagctgtatgacagtgatatggcactcttcctcgccgtcatcatcctcagtggagatcgt
ccaggcctgctgaatgtgaagcccattgaggagctacaggaaacagtcctccactctctg
gagctccaactgaaactcaaccacccagactccctgcagctcttcgccaaggttctgcag
aagatgacagacctgaggcagatagtaacagaccatgtgcacctaatccagctactgaag
aagactgaagtggacatgtgtctccacccactgctgcaggagataatgagagacctctac
tag
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