Oncorhynchus tshawytscha (Chinook salmon): 112255166
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Entry
112255166 CDS
T05605
Name
(RefSeq) secretory phospholipase A2 receptor isoform X1
KO
K06560
mannose receptor, C type
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
112255166
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112255166
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
otw04054
]
112255166
04090 CD molecules [BR:
otw04090
]
112255166
04091 Lectins [BR:
otw04091
]
112255166
Membrane trafficking [BR:
otw04131
]
Endocytosis
Phagocytosis
C-lectin receptors
112255166
Pattern recognition receptors [BR:
otw04054
]
Membrane-bound pattern recognition receptors
C-type lectin receptors
112255166
CD molecules [BR:
otw04090
]
Proteins
112255166
Lectins [BR:
otw04091
]
C-Type lectins
Group 6: Mannose receptor family
112255166
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lectin_C
fn2
UL45
Motif
Other DBs
NCBI-GeneID:
112255166
NCBI-ProteinID:
XP_042179948
LinkDB
All DBs
Position
LG07:complement(8586524..8620323)
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AA seq
1480 aa
AA seq
DB search
MRIYLSRCTESILLICAIVFVINCDCAIEDDVVLEKKDISELYNKGLFIMENTQLKRCIS
SNLVLESCERPTRHMLWKWVSRHRLFNLGSSLCLGLNISDSTQPLGTFECDSPLRTLWWR
CNGNTLYGASQLKLSVAGRLVVVKRASYHQWRRYSTPGEGPCAYPYEEIHTLLGNAHGMP
CALPFKYNNKWYSECTAEGREDHHRWCATTSRYDQDEKWGFCPSQELSCDTFWDSNQESR
ACYQFNLYTILTWSQADSSCLAQGGSLLSITDLTEQMYIRERLADVGVMVWIGLNHLSER
TGWQWSDGAPLSLVNFTSGLSSSPLQDNRQCGVYNSASGGHQWQSLSCEAALPYICKKTP
NDTRRAEPLDNWLYYRTVCSEGWLAHNRYCYKALAEAEAGSWEESSTACNSVGANLTSLH
SLSEVELLLGLLANISGSGSEVWIGLIKKLSSSAVEWSDGSPVDLTLWHVHHPTHSNSQL
CAKTDLTEGNWLLAPCDEKLPAVCRRAGLLPLHPTGAGDEGCPEDWKRKGHSCYIVTSHE
QSHEDAVKGYYCKAPLVTVENRFEQAFLNSLVNEMGTNGSVYYWTALQDQGSQGEYSWLG
GHNGSTLPLLYTNWNRHQPVSAGGCVAMTGGQALGHWEVKDCKSQKALSVCKQSISGYQE
VLFPTVHIDAYAPCPPGWESHSDLLHCYKAFHSEKVLMKRSWEDADFFCQALGAQLASFH
HYKEQVFVKGLLHSMFDGTEGRWFWVGLNKRDPQSAGSWEWSDGTPVVSSFIEDKNEEDD
RRSCAVYSDLTNGLLPQPCDTKHEWICKVPRGMELNKHYWYNDQNEPWVFYRGAEYLLAK
QPFPWEGVNLACMMMGTHLLSVHSKEELRFIRERMGKLSLGSTDWWIGLSTDLVREEFSW
SDESAVDYQNWAEGSSHDAPVKHKQCVTMSSISGQWSAGECGGLHAHVCKRRTVSVVEIP
REPHYIGGCPERWLYFGHKCFLLHLPNSAEEGKSWRDARSICSSFQGTLVAIEDEIEQAY
ITMLLQGGTVGVWIGLRDEDTMKWTNGKPVSYTNWSPVESKNPLTNEWLSGPLGGDDPLC
TVLSNNHNFHLTGKWFDEKCTESGYGFVCQRPQDAAKPPSHSYLHPLPDNIEYKNRRYRV
VRGNMSWYEALHMCLESESELVSVTDPFHQAFLTVLVNRLAFPHWIGLYSQDDGINYQWS
DGSDTVFTHWVAADDDDFILGDCVYMDVTGGWRRADCEMPLQGALCHVPPPKSNAFTSYE
VVCPSTWVRFGASCYSFEPVVQRLTLEEAGEHCKHKANTSEVLTIQTETENRFVLEQLRS
YGFPHQAVWLGMFFNTDAGSMAWFDGSPMDYSNWNVKAPDPSLLTADTCVSTRVSDGMWL
LSQCTDRMGFVCKTNSDTIPEVEVAPLNGLHHSVVPAAVLVAMLIFAVLVAVLWLVYKRN
RTHFHRLPSLGNVYYRHTSSQATDFDGNVLIADLEAHSGE
NT seq
4443 nt
NT seq
+upstream
nt +downstream
nt
atgagaatatatttatcacgctgtacagaatctattttgttaatctgtgcaatagtgttt
gtgattaactgcgactgtgcgattgaagacgatgtggtgttggagaagaaagatatttcc
gaactctacaacaagggtctgttcatcatggagaatacccagttgaagcgctgcatctcc
tctaacctggtcctggagagctgtgagaggcccacccgccatatgctgtggaagtgggtg
tctcgccaccgcctcttcaatctgggtagcagcctctgtctgggcctgaacatcagtgac
tccacccagcccctgggcaccttcgagtgtgactcacccctccggaccctgtggtggagg
tgcaatgggaatacgttgtacggggcttcccagctgaagctgtccgtggctggacgcctg
gtggtggtcaagagggccagttatcatcagtggaggaggtactctacaccgggggagggg
ccttgtgcctatccttatgaggagatccacacactgttgggtaatgcccacggcatgcct
tgtgccctgccgttcaaatacaacaacaagtggtactcggagtgcacggcagagggacgc
gaggaccaccatcgctggtgtgccaccaccagtcgatacgaccaggatgagaaatggggc
ttctgtcccagtcaagagttgagctgcgatacgttctgggactcgaaccaggagagccgt
gcgtgttaccagttcaacctgtacaccatcctgacgtggagccaggccgactcctcctgc
ctggcccagggaggaagtctactcagcatcactgacctcactgaacagatgtacatcaga
gagcggttggctgacgtgggggtgatggtgtggattggactgaaccatctgagtgagaga
acagggtggcagtggtctgatggagctcctctatccttagtcaacttcacctcaggccta
tcatccagcccactgcaggacaacaggcagtgtggagtgtataactcagcgtcggggggg
caccagtggcagagtctgtcctgtgaggctgctctaccctacatctgtaagaagacccct
aatgacaccaggagagctgagcctcttgataactggctgtactaccgcacggtgtgttcc
gagggctggctggcccacaaccgttactgctacaaagccctggcagaggctgaggcaggg
agctgggaggaatcctccactgcctgtaactccgtaggggccaacctcaccagtctacac
tctctatctgaggtagagctgctgctgggcctgctggctaacatctcagggtctggctca
gaggtgtggatcggcctgataaagaagctatcgtcttcagctgtagagtggtcagacggc
tccccagtcgacctcactctctggcacgtgcatcatcctacccatagcaacagtcagctc
tgtgccaagactgacctaacggaggggaactggctgttggcaccatgcgatgagaagctc
cctgcagtgtgtaggagagcaggacttctgcccctacaccccactggagcaggggacgag
ggctgtcctgaggattggaagcggaagggccactcttgctacattgtgacgagccacgag
cagagccatgaagacgctgtcaagggttactactgcaaggctcctctggtcacagtggaa
aacaggtttgagcaggcctttctgaacagcctggtaaatgagatgggaaccaatggtagt
gtatattactggacggccctacaggaccagggtagccaaggagagtacagctggctgggg
ggacacaacggatccaccctacccctgctctatacaaactggaacaggcatcagccagtc
agtgcaggtggctgtgtggctatgacaggcggccaggccttgggtcactgggaagtgaag
gactgcaaatcccagaaggccttgtcagtttgtaaacagagcatcagtggttaccaggag
gtcctgttccccacagtccatattgacgcttacgccccctgtcctccaggctgggaatca
cactccgacctgctccactgttacaaggcgttccacagcgagaaggtcctgatgaagcgg
tcgtgggaagacgctgacttcttctgccaggctctaggagctcagctggccagcttccac
cactacaaggagcaggtctttgtcaaaggactcctccactccatgtttgatggaacagag
ggtcgttggttctgggtgggcttgaataagagagacccccagtcagcaggatcttgggag
tggtctgacggcacccccgtggtgtcctccttcatagaggataagaacgaggaggatgac
agacgtagctgtgccgtgtacagcgacctgaccaacggcctcctgccacagccctgcgac
accaagcacgagtggatctgcaaggttcccagaggcatggagctgaacaaacactactgg
tataatgaccagaacgagccctgggtgttctacagaggagcagagtatctgctggccaag
cagccttttccctgggagggtgttaacctggcctgtatgatgatgggcacccacttgctg
tctgtccactctaaagaggagctccgattcatcagagagcgcatggggaagctctctctg
gggtcgactgactggtggatagggctgtccacagacctcgtgagggaagagttcagttgg
agtgatgagtccgctgtggattatcagaattgggcagaaggaagctcccacgatgcccca
gtgaaacataaacagtgtgtgaccatgtcctctatctcaggtcagtggtcggcgggtgag
tgtggcggtctccatgcccacgtatgtaagcgccggaccgtgtccgtggtggagattccc
agagagcctcactacatcggaggctgtccagagagatggctctacttcggacacaagtgt
ttcctgctgcaccttcccaacagtgctgaggaggggaagagctggagagatgcccggtct
atctgctcctctttccaaggcacgctggtcgccatcgaagacgagatcgagcaagcgtat
atcaccatgctgctccagggcgggacagtgggcgtttggattggtctacgggatgaggac
accatgaaatggaccaatgggaaacctgtcagctacaccaactggtcccctgtagaatcc
aagaaccctctgacgaatgagtggctgagcgggcccctgggcggggacgatcctctgtgc
acggtgctctccaacaaccacaacttccacctgacagggaagtggttcgacgagaagtgc
acagaaagtggatacggctttgtctgtcagagaccccaagacgcagctaaacccccatcc
cactcctacctccaccctctccctgacaatattgagtacaagaaccgcagatacagggtt
gtccgtggcaacatgagctggtatgaggcgctgcatatgtgcttagagtctgagtctgag
ctagtgagcgttaccgaccccttccaccaggctttccttactgtccttgtcaatagattg
gcattcccccactggattggactgtatagtcaagacgatgggatcaactaccagtggtct
gatggcagtgacacggtcttcactcactgggttgcggccgatgatgatgatttcatcctg
ggggactgtgtgtacatggacgtcaccgggggctggaggagggccgactgtgagatgccg
ctccagggagccctgtgccatgtcccaccacctaagagtaatgcgttcaccagctacgag
gttgtgtgtccatcgacgtgggtgaggtttggcgccagctgctacagctttgagcccgtg
gtccagagactgaccctggaggaggccggagagcactgcaaacacaaagcgaacacgtca
gaggtcctgaccatacagacagagacggaaaacaggttcgttctggagcagctgcggtcg
tatggcttcccacatcaagccgtctggctggggatgttcttcaacactgacgcgggctcc
atggcatggttcgatggttctcctatggactactccaactggaacgtcaaggccccagac
cccagcctgctgacagcagacacctgtgtgtccaccagggtgtctgatgggatgtggctc
ctctctcagtgcactgacagaatgggctttgtctgcaaaactaactcagatacgatcccc
gaggtagaagtggcgccactaaatgggttgcaccacagtgtcgtcccagccgcggtcctg
gtggccatgctgatcttcgccgtgcttgtggcggtgctctggctcgtctacaagaggaac
aggacgcacttccacagactgccgtccctgggaaacgtgtactacagacatactagttcc
caggccacagacttcgatggaaacgttctcatcgcagatctggaagctcactctggagaa
tag
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integrated database retrieval system
