Oncorhynchus tshawytscha (Chinook salmon): 112255262
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Entry
112255262 CDS
T05605
Name
(RefSeq) paired box protein Pax-7-like isoform X1
KO
K09381
paired box protein 3/7
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112255262
Transcription factors [BR:
otw03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
112255262
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PAX
Homeodomain
Pax7
Homeobox_KN
HTH_23
HTH_32
HTH_Tnp_IS1
Motif
Other DBs
NCBI-GeneID:
112255262
NCBI-ProteinID:
XP_042180337
UniProt:
A0A8C8HBN5
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Position
LG07:complement(40331539..40414322)
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AA seq
518 aa
AA seq
DB search
MATLPGTVPRMMRPAPGQNYPRTGFPLEGQYTGPEYVYCGTVSTPLGQGRVNQLGGVFIN
GRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIGGSKPR
QVSTPDVEKRIEEYKRENPGMFSWEIRDKLLKDGVCDRSTVPSGEASVSSISRVLRARFG
KKDDDDDSDKKDEDGEKKTKHSIDGILGDKGNRTDEGSDVESEPDLPLKRKQRRSRTTFT
AEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFN
HLLPGGFPPTGMPSLPTYQLPESSYPGTTLSQDGSSTLHRPQPLPPSSMHQGGLSDGSSP
YGLSSNRHSFSSYSDTFMSQSAASNHMNPVSNGLSPQVMSILSNPNAVPSQSQHDFSISP
LHGSLESSNPISASCSQRSDSIKGVDSLTSSQSYCPPTYSATSYSVDPVTAGYQYSQYGQ
TAVDYLTKNVSLSTQRRMKLGDHSAVLGLLQVETGQAY
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atggctactttaccaggaacagtgcctcgaatgatgcgccctgcgccaggccagaactac
ccccgcaccggattccctctggaaggacaatatacaggacctgaatatgtttattgtgga
acagtatcaaccccgctgggccaaggtcgggtgaaccagctcggtggagtgttcatcaac
gggaggccactgccaaatcatatcagacacaagatagtagagatggcccaccatggcatc
cgaccctgtgtaatctcgcgacagctacgagtttcccatggttgtgtctccaaaatcctc
tgtcggtaccaggagaccggttccattcgtcccggggcaataggaggcagcaagcctagg
caggtatcaactccggatgtggagaagcggattgaggagtacaagcgagaaaaccctggg
atgttcagttgggagatccgggacaagctgctgaaggacggggtgtgcgacagaagcact
gttccttcaggtgaggcttctgtgagctccatcagccgagttctgagggcccgattcggc
aagaaagatgacgacgacgatagtgataagaaggatgaagacggggaaaagaaaacaaag
cacagcatcgacgggattctcggcgataaaggtaatcgtacagatgagggttcagacgtg
gagtcggagccggaccttcccctgaagaggaagcagcgtcgcagccgcaccaccttcaca
gccgagcagcttgaggagctggagaaggcctttgagaggacacactacccagacatctac
accagggaagagctggcccagaggaccaagctcactgaggcccgcgtgcaggtgtggttc
agcaacagaagggccagatggcgcaagcaggcaggagccaatcagctggccgccttcaac
cacctgttacctggaggcttcccgcccacggggatgcccagcctacctacctaccagtta
cctgagtcctcataccccggcactacactgtcacaggatggcagcagtacgttgcatcgg
ccccaacccctgcctccgtcctccatgcaccagggcgggctctctgacggcagctccccc
tacggcctctcgtccaatcgccacagcttctccagctactcagacaccttcatgagccaa
tcagctgccagcaaccacatgaacccggtcagcaacggcctctccccacaggtgatgagc
atcctgagtaaccccaacgccgtgccctcccagtcccaacatgacttctccatctccccc
ctccacggcagcctggagtcctccaaccccatctcagccagctgcagccagcgctctgac
tccatcaagggggtggacagcctgacctcctcccagtcctactgcccccccacctacagc
gccaccagctacagtgtggaccccgtcaccgccggataccagtacagtcagtatggacag
actgcagtggactacctgactaagaacgtgagtctgtccacccagaggaggatgaagctg
ggagaccactctgctgtcctgggactgctgcaggtggagacgggacaggcctactga
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