Oncorhynchus tshawytscha (Chinook salmon): 112255324
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Entry
112255324 CDS
T05605
Name
(RefSeq) LOW QUALITY PROTEIN: voltage-dependent calcium channel subunit alpha-2/delta-3-like
KO
K04860
voltage-dependent calcium channel alpha-2/delta-3
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04010
MAPK signaling pathway
otw04260
Cardiac muscle contraction
otw04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
112255324
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
112255324
04261 Adrenergic signaling in cardiomyocytes
112255324
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
otw04040
]
112255324
Ion channels [BR:
otw04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
112255324
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
VWA_N
VGCC_alpha2
dCache_1
VWA
VWA_3
VWA_2
MCP-like_PDC_1
dCache_2
VWA_CoxE
Motif
Other DBs
NCBI-GeneID:
112255324
NCBI-ProteinID:
XP_042179656
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Position
LG07:complement(56714485..56781746)
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AA seq
952 aa
AA seq
DB search
MKVVKNLSKKMEEMFRKKKEAIRRLVEAAEEAHLQHEENPELQYEYFNAVLINEVDEEGN
NVELGGEFVLEPNEHFNNLSVNLSLSVVQVPTNMYNKDPAIVNGVYWSESLNKVFVDNFX
KDPSLIWQYFGSAKGFFRQYPGVKWHPDEHGVIAFDCRNRKWYIQAATSPKDVVILVDVS
GSMKGLRLTIARQTVSSILDTLGDDDFFNIIAYNQEIHYVEPCLNGTLVRADRNNKAHFR
EHLDKLFAKGIGLLGDALTEAFTILGDFNQTGHGSVCSQAIMLVTDGATQMYDDVFAKFN
WPDRKVRIFPYLIGRESAFADNMKWMACANKGYFSQISTLADVQENVMRYLHVMSRPKVI
DHEHDTVWTEAYMDSTGSIIKGPSLMTTVAMPVFSTKNETKNQGILLGVVGTDIPLQELM
KIIPKHLLGIHGYAFAITNNGYILTHPDLRPLYQKGQKRRKPNYSSVDLSEVEWEDKDDF
LRNAMVNRKTGTFSMEVKKTVDKGKRLLKMHNDYYYTEVKGTPFSVGVALSRGHGKFFFR
GNVSVEAGLHDLEQPDVALADEWTYCNTDEYYEHRSLSQIQAIKLYLTGRKPLIKCDREL
IQEVLFDAVVTAPLEAYWTGLALNKSENSDKGVEIAYLGTRTGLSRTNLFVVQEDLSNQD
FLTAEDKEGVFNADHFPLWYKRAAEQVPGTFVYSIPFGGNENKSVVLASTAIQLLDDRKS
PIVASVGIQMNLNFFQRKFWTASRQCAALDGKCTISCDNEDIKCYLIDNNGFILVTEDYS
QTGEFFGEVEAAVMTKLLLIGSFKRINLYDYQALCREYAGSSDSGHCLSHPFSIVKWLLT
ELVMFLLEFNLYSWWHVDLSVKAQNSRGKTMLVPCDTEYPAFVSERTIKETTGNIDCEGC
VRSFVIQQIPSSNLFMVVVDNKCDCSSTLPVSMDPIEIMYILVKFGNIKCVF
NT seq
2859 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtggtcaaaaatctatcgaagaagatggaggagatgttccggaagaaaaaggag
gccattcggaggctggtggaggcagcagaagaggcacatctacagcacgaggaaaaccca
gagctgcagtatgagtacttcaacgcggtgctgatcaacgaggtggatgaggagggcaac
aacgtggagctgggaggagagtttgtcctcgaacccaatgaacacttcaacaacctgtca
gtcaacctcagcctcagtgtggtgcaggtgcccaccaacatgtataacaaagatcctgcc
atagtgaatggggtgtattggtcagagtccttgaataaagtgtttgtggataactttnga
aaagatccgtccctgatatggcagtactttggcagtgccaagggcttctttaggcagtat
cccggggtcaaatggcatccagacgaacacggagtcatcgcctttgactgcaggaacagg
aaatggtacatccaggcagcgacatctcctaaagacgtggtgattctagtagatgtaagt
ggcagtatgaagggcctgagactgaccatcgccagacagacggtatcctctatactggac
acactgggagacgacgacttcttcaacatcatcgcttacaatcaagagattcactatgtg
gagccttgtctgaatggcacactggtacgagcagacagaaacaataaagctcatttccga
gaacatctggacaagctgtttgccaaagggattggtctgctgggtgatgctctgaccgaa
gcattcaccattctaggtgattttaaccagactgggcatggcagtgtgtgtagccaggcc
atcatgctggtgactgacggggccacacagatgtacgacgatgttttcgccaagttcaac
tggccagacagaaaggtgcgcatattcccttacctgattggccgagagtctgcctttgct
gataacatgaaatggatggcctgtgctaataaagggtatttcagtcagatctccacactg
gctgatgtacaggaaaatgtgatgaggtatcttcatgttatgagtcgtcctaaagtcatc
gatcatgaacatgacacggtctggacagaagcctacatggacagcactgggagtatcata
aagggccccagcctgatgaccactgtggccatgcctgtgttcagcaccaagaacgagacg
aagaaccagggtattctcctcggggtagtgggcacagacattcccctacaggaacttatg
aagatcatccctaaacacctgctgggtatccacggttacgcgtttgccatcactaacaat
ggctacatcctgacccatccagacctgaggccactgtaccagaagggccagaagaggagg
aaacccaactacagcagtgtggacctgtctgaggtggagtgggaggacaaggatgacttt
ctgcgtaatgccatggtcaacaggaagacggggactttctccatggaagtgaagaagaca
gtggacaaagggaaacgtctgctgaagatgcacaatgactactactacactgaagtcaag
ggaacgcccttcagtgtcggtgtggctttgtccagaggccatggcaaattcttcttcaga
ggaaacgtctccgtagaagcagggcttcatgacctggaacagccagatgttgcgctggca
gatgaatggacgtactgcaacacagacgagtactatgagcaccgttctctctcccagatc
caggctattaaactctacctgaccggacgcaaaccactcatcaaatgtgacagggagctg
atccaggaggttctgtttgatgctgtggtcacagccccactggaggcctactggacaggc
ctggccctcaacaagtcagagaattcagataaaggtgtggagattgcttacctgggcaca
cgcactggcctctctagaaccaacctgtttgttgtgcaagaggatctatccaatcaagac
ttcctgacagcggaggataaggagggggtgtttaacgctgaccacttccctctgtggtat
aagagagcagcagagcaggtccctggcacctttgtctactccatcccctttggaggaaat
gagaataagagtgtggttttggccagcaccgccatacagctgctggatgacaggaagtca
cccattgttgcatccgttgggattcaaatgaacttgaatttctttcagaggaagttctgg
accgctagcagacagtgtgctgctctggatgggaagtgcaccatcagctgtgataatgag
gacatcaagtgttacctcatagacaacaacggctttattctggtcacagaagactactct
cagacaggggagttctttggtgaggtggaggctgctgttatgaccaagctgctcctcatt
ggctccttcaagaggatcaatctgtatgactaccaggctctctgtagagagtatgccggc
agcagtgacagtggacactgtttatcacatcccttctccattgtgaaatggctcctgact
gaactagtaatgttcctgctggaattcaacctgtacagctggtggcatgttgacctctct
gtcaaagcccaaaactcgaggggaaagaccatgttggtgccatgtgatactgagtaccct
gcctttgtctctgagcgtaccatcaaagagaccacgggcaacattgactgtgagggctgt
gtcagatcttttgttattcagcagattcccagcagtaacctattcatggttgtcgtggac
aacaagtgtgactgtagctccacccttccagtttccatggaccccattgagattatgtat
atccttgtgaagtttgggaatattaagtgtgttttttag
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