Oncorhynchus tshawytscha (Chinook salmon): 112255372
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Entry
112255372 CDS
T05605
Name
(RefSeq) arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 3 isoform X1
KO
K12489
Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
112255372
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112255372
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
otw04147
]
112255372
Membrane trafficking [BR:
otw04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
112255372
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
112255372
Exosome [BR:
otw04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
112255372
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAR_3
ArfGap
PH
Ank_2
Ank
Ank_4
Ank_3
Ank_5
PH_11
BAR
PH_8
DASH_Spc19
Motif
Other DBs
NCBI-GeneID:
112255372
NCBI-ProteinID:
XP_042180812
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Position
LG07:complement(71117341..71275985)
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AA seq
870 aa
AA seq
DB search
MTVDFEECIKDSPRFRAGINEVETDVVEIEAKLDKLVKLCSGMIEAGRAYVSANKLFVNG
IKDLSQQCKKEVMISECLEKCGESLQEIVNYNMILFDQAQRSIKQQLHTFIKEDVRKFKE
TKKQFDRVREDMEIAQVKNGQAPRNKPHEVEEATSSLTLTRKCFRHLALDYVLQINVLQA
KKKFEILDAMLSFMRAQYTLFQQGYKILDEIDPYMKKLAAELDQLVIDSAMEKRDLEHKH
ATIQQRTLMEDFSYDDNKVEFNVDAPNGVVMEGYLFKRASNAFKTWNRRWFSIQNSQLVY
QKRLKDALTVVVEDLRLCSVKPCEDGERRFCFEVVSPTKSCMLQAESEKLRQAWIQAVQA
SIASAYREISDNYYIERLDRTASPSTSSIDSASEPRGEKWGRGGEGRGESILHRVQTLPG
NELCCDCSQAAPCWASINLGVLLCIECSGIHRSLGVHCSKVRSLTLDSWEPELLKLMCEL
GNNVINHIYEGACEELGVKKPGPSSPRQEKEVWIKAKYVERRFLKKMSVSDSLVEGERKS
RPWSVKKCHRHNSSMRGAPKTRRKYRHDPGLISPGNLSAAAAAAKLRRDSLFCPDEMDNL
FSYFDTGNGTRSPAGLSSDSGLGGSTDGSTDILVFGSVVDSVTEEVECEGESEEEESSGE
VEIEQEAGSDPEEPLPPGALLYRSSRLHNLPLMAEALAHGADVHSASDEEGKTPLIQAVT
GGSLTACEFLLQNGADVNQRDMGGRGPLHHATYLGHTGQVCLFLKRGACQTEVDEEGHDP
LSMAVQAANADIVTLLRLARMNEEMREAEGPFGQPGQYPSSSPTEHQYRKCVAMGTSRKV
KRKDSVRDRVTQHITSFGSSRSWRPTSPKS
NT seq
2613 nt
NT seq
+upstream
nt +downstream
nt
atgacggtggactttgaagaatgtattaaagactctccacggttcagggctggcatcaat
gaggtggagacggatgtggtggagatcgaagctaaactagataagctggtgaagttatgt
agcggtatgatcgaggcgggcagggcgtacgtaagcgccaacaagctgtttgtcaacggc
atcaaagacttgtctcagcagtgcaagaaggaagtaatgatctctgagtgtctggagaag
tgtggggagagcctgcaggagatcgtcaactacaacatgatcctatttgaccaggcccag
aggtcaatcaaacagcaactgcacaccttcatcaaagaggacgtgcgtaagttcaaggag
acaaagaagcagtttgaccgtgtgagggaggacatggagatagcccaggtgaagaacggc
caggcccccaggaacaaacctcatgaggtggaggaggccacttcctctctcaccctgacc
aggaagtgcttcaggcacctggccctggactacgtactgcagatcaatgttcttcaggct
aagaagaagtttgagatccttgatgcaatgctgtcgttcatgcgagcccagtacaccttg
tttcaacagggctataaaatattggatgagattgatccctacatgaagaaactagctgca
gagctggatcagctggtcatagactcagccatggagaagagagacctggaacacaaacat
gctaccatacagcagaggactctgatggaggacttctcctatgatgataataaggtggag
ttcaacgtggatgctcctaacggagtggtgatggaaggttacctgttcaagagggcctcc
aatgccttcaagacctggaacagacggtggttctccatacagaacagccagctggtctac
cagaagcgacttaaggatgccctgacggtggtggtggaggacctgaggctgtgttcagtc
aaaccttgcgaggacggagagaggaggttctgcttcgaggtggtgtcccccactaagagc
tgtatgctccaggcagagtcagagaagttacggcaggcctggatccaagctgtacaggcc
tccatcgcctctgcatacagagagatatcagacaactactacatcgagcgtctggaccgg
acagcctccccctctaccagcagtatagactcagccagcgagccccggggggagaaatgg
gggagagggggtgagggcaggggggagagcatcctccaccgggtgcagaccctcccgggt
aatgagctgtgttgtgactgttcccaggctgcaccatgctgggcctccatcaacctggga
gtcctgctctgcattgagtgctctggcatacacaggagtctgggggttcattgctccaag
gttcgttcactaacactggactcctgggaaccagagctactcaagttgatgtgtgagctg
ggtaacaatgtgattaaccacatctatgagggagcttgtgaggaactgggagtgaagaaa
cctggaccttccagtcctagacaagagaaggaggtgtggatcaaggctaaatatgtggag
aggcgtttcctgaagaagatgagtgtcagtgactcattggtggaaggtgagaggaagtcc
cgcccctggagcgtgaagaagtgtcatcgccacaacagctccatgcgaggagcgcccaaa
acccgcaggaaataccgacacgaccccggtttgatttcaccaggaaacctctccgcagct
gcagcagcagcgaagctccgtcgtgactctctgttttgtcctgatgagatggacaacctc
ttctcctacttcgacactggcaatggcacccgcagccctgcaggtctgagcagtgacagt
gggctgggaggcagtacagacgggagcacagacatcctggtgtttggctcagtggtcgac
agtgtcaccgaggaggtagagtgtgagggtgagtcagaagaggaggagtctagcggggag
gtggagatagagcaggaggcgggatcagaccctgaggagcccctccccccgggggcgttg
ctctaccggtcgtcacggctacacaacctgccactcatggccgaggcgctggcgcatggg
gcagacgtccactctgccagcgatgaggagggaaagaccccgctcatacaggccgtgaca
gggggctctctgacagcgtgtgagttcctgctgcagaatggggctgatgtgaaccagagg
gacatgggggggagaggacccctccaccacgctacctacctgggacatacaggtcaggtg
tgtctgttcctgaagagaggggcttgtcagacggaggtggatgaggaaggtcacgaccct
ctgagcatggctgtccaggccgctaacgccgatattgttacattgttgcggttagcacgg
atgaacgaggagatgcgcgaggcggagggtccgtttggtcagccaggtcaataccccagc
agctccccaactgaacatcagtacaggaaatgcgttgccatggggaccagcaggaaggta
aagcgcaaggatagtgttcgggatagagtaacacaacatatcacatctttcgggagttct
cgctcatggcgtcccaccagcccgaaaagctaa
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