Oncorhynchus tshawytscha (Chinook salmon): 112255502
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Entry
112255502 CDS
T05605
Name
(RefSeq) homeobox protein Hox-C9a
KO
K09294
homeobox protein HoxB/C/D9
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112255502
Transcription factors [BR:
otw03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
112255502
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hox9_act
Homeodomain
HTH_65
Homeobox_KN
CI-B14_5a
Motif
Other DBs
NCBI-GeneID:
112255502
NCBI-ProteinID:
XP_024284250
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Position
LG07:48417990..48420911
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AA seq
259 aa
AA seq
DB search
MSTTCPIRNYYVDSLINHESEDVLASRFSELPPTRSRQTTVVPECPDYPSCSFAPKPSVF
SSSWGPVHSQSSVVYHPYTHQPHVGMDSRYVRSWLEPISGTVSFPGYPANCRHYGLKPDG
FPQPSTGDCITSNSRGYPDYFYNTCVDIRDKAQQIVPSPESEVLASGKHKDEKTEFDPSN
PVANWIHARSTRKKRCPYTKYQTLELEKEFLFNMYLTRDRRYEVARVLNLTERQVKIWFQ
NRRMKMKKMNKEKTESNEQ
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaccacgtgtcccatacgcaattattatgtggattctttgataaaccatgagagc
gaggacgtgctggcgtcgcggttctcagagcttccccccacccgctcgcgtcagacgaca
gtagtaccagagtgccccgattatccctcctgcagttttgcgccgaaaccttctgtcttt
tcctcctcctggggcccagttcactcccaatcctcagtggtctaccacccatacacccac
caacctcacgttggaatggactcgaggtatgttcgctcatggctggagcccatatctgga
acagtatcctttccaggctacccggctaactgcagacactacggactcaaacccgatggt
ttccctcagcccagtaccggagactgcatcacctccaacagtcgcggttacccagactat
ttctacaacacctgcgtggacatccgagacaaggcccagcagatagtcccttctccagag
tcggaggttttggcttccgggaagcacaaagacgaaaagacagaattcgacccaagcaac
ccggtggcgaattggatacacgctcgttcaacgaggaagaaacggtgtccttatacaaaa
tatcagactctcgaactcgaaaaagagtttttgttcaatatgtaccttaccagggaccgt
cgatatgaggtcgctcgggttcttaatttgaccgagagacaggtcaaaatttggttccaa
aatcggcgaatgaagatgaagaaaatgaataaagagaagacagaaagcaatgagcagtaa
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