Oncorhynchus tshawytscha (Chinook salmon): 112255655
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Entry
112255655 CDS
T05605
Name
(RefSeq) serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B beta isoform isoform X1
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03015
mRNA surveillance pathway
otw04261
Adrenergic signaling in cardiomyocytes
otw04382
Cornified envelope formation
otw04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
112255655
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
112255655
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
112255655
09158 Development and regeneration
04382 Cornified envelope formation
112255655
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
otw01009
]
112255655
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
otw03019
]
112255655
03036 Chromosome and associated proteins [BR:
otw03036
]
112255655
Protein phosphatases and associated proteins [BR:
otw01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
112255655
Messenger RNA biogenesis [BR:
otw03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
112255655
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
112255655
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
WDR55
Beta-prop_EML
Beta-prop_IFT140_1st
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Y_phosphatase2
Motif
Other DBs
NCBI-GeneID:
112255655
NCBI-ProteinID:
XP_042181749
LinkDB
All DBs
Position
LG08:complement(64586475..64631722)
Genome browser
AA seq
452 aa
AA seq
DB search
MLNPIQVLCSDITSLSLEPEPFASYTEADIISTVEFNHTGELLATGDKGGRVVIFQREPE
GKTEPFSQGEYNVYNTFQSHEPEFDYLKSLEIEEKINKIRWLPQQNAAHFLLSTNDKTVK
LWKVSERDKRPEGYNLKDEEGRMKNLSTVTSLQVPVLKPMDLMVEVSPRRVFANAHTYHV
NSISVNSDHETYMSADDLRINLWHLGITNRSFNIVDIKPVNMEDLTEVITAAEFHPHHCN
LLVYSSSKGTLRLCDMREAALCDKHSKLFEEPEDPSNRSFFSEIISSVSDVKFSHSGRYL
LTRDYLTAKVWDLNMENKPLEIYQVHEYLRSKLCSLYENDCIFDKFECVWNGSDSVIMTG
AYNNFFRMFDRNTNRDVTLEASRESSKPRAVLKPRRVCQGGKRRKDDISVDSLDFTKKIL
HTAWHPTENIIAIAATNNLYIFQDKLNQEMHG
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgttgaaccctatccaggtcctgtgctccgacatcacttccctctctctggagcccgag
ccatttgcctcttacactgaagctgatatcatctccactgttgagttcaaccacactgga
gagctcctggccacaggggacaaggggggacgtgtggtcatcttccagagggaacctgag
ggtaagacagagccattctcccagggggagtataatgtctacaacaccttccagagtcat
gagccggagtttgactacctgaagagtctggagatagaggagaagatcaacaagatacga
tggctgccacagcagaacgccgcccacttcctcctctccaccaatgataagaccgttaag
ctgtggaaggtgagtgagcgggacaagaggcctgaaggctacaacctgaaggatgaggag
ggcaggatgaagaacctctccactgtcacctcactacaggtgccggtgttgaagcccatg
gatctgatggtggaggtgagtcctcggcgtgtctttgccaacgcccacacctaccatgtc
aactccatctctgtcaactctgaccatgagacctacatgtcagctgacgacctgaggatc
aacctctggcacctgggcatcaccaaccgcagcttcaacatcgtggacatcaagccagtg
aacatggaggatctgacagaggtgataacagcagcagagttccatcctcaccactgtaac
ctgttggtctatagcagcagtaagggaactctacggctctgtgacatgagagaggccgca
ctgtgtgacaaacactccaaactgtttgaggagccagaagaccccagtaaccgctccttc
ttctctgagatcatctcgtctgtgtcggacgtgaagttcagccacagcgggcgctacctg
ctgaccagagactacctcactgccaaggtgtgggacctcaacatggagaacaagcccctg
gagatataccaggtgcatgaatacctccgcagcaagctttgctccctgtacgagaacgac
tgcatcttcgacaagtttgagtgtgtctggaacggctcagacagtgtgatcatgactggg
gcctacaacaatttcttccggatgtttgaccggaacaccaaccgtgacgtgaccctggag
gcgtccagggagagcagtaagccccgggccgtgctcaagcctcggcgcgtctgccagggc
gggaaacgacgcaaggatgacatcagcgtggacagcctggacttcaccaagaagatcctg
cacacggcctggcaccccacggagaacatcatcgccatcgctgccaccaacaacctgtac
atcttccaggacaaactcaaccaggagatgcatggctga
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