Oncorhynchus tshawytscha (Chinook salmon): 112255684
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Entry
112255684 CDS
T05605
Name
(RefSeq) rho guanine nucleotide exchange factor 6-like isoform X1
KO
K05729
Rho guanine nucleotide exchange factor 6
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
112255684
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112255684
Membrane trafficking [BR:
otw04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
112255684
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RhoGEF67_u2
betaPIX_CC
RhoGEF
SH3_2
SH3_1
SH3_9
CH
PH
RhoGEF67_u1
CENP-Q
Mis12
Tra1_central
Motif
Other DBs
NCBI-GeneID:
112255684
NCBI-ProteinID:
XP_042181662
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All DBs
Position
LG08:61422240..61451349
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AA seq
766 aa
AA seq
DB search
MNPEEQTVTWLISLGVLNSPKKNIADPEEFLKTSLKDGVVLCKLMERLVPGTVPKYCQEP
RNEAECIANIKEFLRGCTSLKVEGFEPECLYSGEKFNKVLTTLLGVNFATQDCGTERSCP
QSGTPAPSQSTTSHTHTSSRSKSLPRQSKPAEMSENGGGGLVLVKARFQFKQNNEDELSF
NKGDLISVSRQEEGGWWEGSLNGKTGWFPSNYVREVKPCDKPVSPKASQLTKNYYSVVVQ
DILEHEREFVKELQTMLSCYLRHLKASNKLSITDSGSLSGNLEEILTFQQGLVLALDECT
KVPESQQRLAACYLNLIGQIRRLYRSYCSSHPSAVCVLTDHSEELGTFMESQGASPPGIL
TLTTSLSKPFMRLDKYPILLQELERHMEEAHPDYSDILKVTVAFKSLVAQCQDLRKRKNL
ELQILSEPVRGWEGDSMKSLGHVAYMSLVHMQNGTNEEKEERYLMMFPGVLVLLSASPRM
SGFIYQGRLPLTGSTVSRQTEDTENGHYTFEITGSTMDRITVFCSNPQELQEWLDHLHAY
SEGASPVGTIIKPVSMVGTPTHLPSFSTPSQANRGPLEPPKTTKPWSLSCLRPAPPLKPS
AALGYKERMSSILKDSSKSSGPIKNFFPKRRAERKHSDEEFLLRKSTAALEEDAQILKVI
EAYCTGASQHQASTAVRKMCVPQVLLPEEEKIMVEEMKNNGQTSIEEKSLVDAVYALKDE
VHELKKENKWMKQCMEEEQKSRKELERVVRKLAKQKNDCAWEDGGH
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atgaacccagaggagcagaccgtaacgtggctgatatcattaggggtgcttaattcaccc
aagaaaaacatagctgacccagaagaatttctgaaaacatctctgaaagatggggtcgtc
ttgtgcaaactcatggagcggctcgtgcccggcactgttccaaagtactgtcaggaaccg
aggaacgaagccgaatgcatcgccaatatcaaggagtttctgagaggatgcacatcctta
aaagtagaggggtttgaaccagagtgcctgtactctggcgagaaatttaacaaagtgctg
accactctgctgggagtcaacttcgccacccaagactgtggcactgagaggtcatgtccc
cagtccggcacacctgctcctagccagtccaccacctcacacacacacacctcatccagg
tccaagtctctgcccagacaatccaaaccagcggagatgtcggagaacggcggaggcggg
ttggtgctggtgaaggcgcgcttccagttcaagcagaacaacgaggatgagctgtccttc
aacaagggagacctgatcagtgtgtcgcgccaggaggagggcggctggtgggagggctcg
ctcaacggcaagacgggctggttccccagcaactatgtccgcgaggtcaagccctgtgat
aaacctgtgtctcctaaagcatctcaactgaccaagaactactacagtgtggtggtgcag
gacatcctggagcatgagagggagtttgtcaaggagctgcagacaatgttgagctgttac
ctacgacacctaaaggccagcaacaagctgagcattacagacagtggcagtctgagtggt
aacctggaggagatcctcaccttccagcagggtctggttcttgctctggacgagtgcacc
aaagttccagagagccagcagcgattggctgcctgctacctcaacctgattggtcagatc
aggaggctgtaccgctcatactgttccagtcacccctcggctgtctgcgtactcactgac
cacagtgaggagctgggtacgttcatggagagccagggggccagtccgccaggcatcctg
accctgaccaccagcctgagtaaacccttcatgaggctggacaagtatcccatcctgctg
caggagctggagagacatatggaggaggcccacccggactacagtgacatcttgaaggtt
acggtggcttttaaaagcttggtggcccagtgtcaggacctgcggaaacgtaagaacctg
gaactacagatcctgtcggagccagtgagaggctgggagggagacagcatgaagtctctg
ggtcacgtggcctacatgtccctggtccacatgcagaacgggaccaatgaggagaaggag
gagcgctacctcatgatgtttcccggtgtgctggtcctgctgtctgctagtccgcgcatg
agcggcttcatataccagggaaggctgccgctgacaggctccacagtctccaggcagacg
gaggacacggagaacggccactacacctttgagatcacaggaagcacaatggatcgcatc
acagtgttctgcagtaacccccaggagctgcaggagtggctggaccatctccatgcctac
agcgaaggagccagccccgtgggcaccattatcaagccggtcagtatggtgggcaccccc
actcacctgcccagcttcagcacccccagccaggccaaccggggacccctggagcccccc
aagaccaccaagccctggtctctgagctgcctgcgccccgccccacccctcaagccctcc
gctgcactgggctacaaggagaggatgtcttctatcttgaaggactccagtaagagctct
gggcccattaagaatttcttcccaaaacgcagagcagaaaggaaacattccgacgaggag
ttcctcttacggaaaagtacagctgctctggaggaggatgcccagattctgaaagtgatc
gaggcctactgcacaggggccagccagcatcaggccagcacagcggtgaggaaaatgtgt
gtccctcaggtcctgctgcctgaggaagagaagatcatggtggaggagatgaagaacaac
ggtcagacaagcatagaggaaaagagtctggttgatgcagtatatgctttaaaggatgag
gtccatgaattaaagaaggagaacaagtggatgaagcaatgtatggaggaggagcagaag
tctcgtaaggagctggagagagtggtcaggaagctggccaagcagaagaacgactgtgct
tgggaggatggagggcactga
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