Oncorhynchus tshawytscha (Chinook salmon): 112255685
Help
Entry
112255685 CDS
T05605
Symbol
ice2
Name
(RefSeq) LOW QUALITY PROTEIN: little elongation complex subunit 2
KO
K26144
little elongation complex subunit 2
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
otw03021
]
112255685 (ice2)
Transcription machinery [BR:
otw03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Little elongation complex (LEC)
112255685 (ice2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NARG2_C
Motif
Other DBs
NCBI-GeneID:
112255685
NCBI-ProteinID:
XP_042183503
LinkDB
All DBs
Position
LG01:complement(186995..248352)
Genome browser
AA seq
1039 aa
AA seq
DB search
MELTWEDVPLPAPDGLLFNKDLYDKYSLAPTIKGLWAIAVVSPTVKVDVKEELEDTTGPA
KLPSTQNQSNSSSNINDERSGTGEPCSDSQDEHGDRKDDHPPAGEAVSRQEPSHPRPSGQ
DPGLPSQVPELFPEPRIPYPCFSRLTSKDQLTYLHVLTSKQPREASQTLLLHVNSERSEF
MRYLQEVARMCPDDYNYISQGAALYSEEYLRACLDQMRMYPQLYQIHEITSLTGGNFSSS
LQLNFEKQLLTMGEVVITDHKVVPNEAQLAFDYETVSSDIPPVKKAKLSHSGISTDSNAE
KLSGRYEPHVVLSRESLVRLLDNHGPDFTDPWELPVVVKTNPGRGSSRSKTVYIDPPLLQ
TEMTVRERSLLFHEESMKLSVNKTGTKNVFHLMTETPAMNKQLPAESSQRRLASFETSGL
DFGLDLTDLETFGETTQSPKRLKTHHLQKDLVSQPKTKSKQYSGTLGKEVSKASRTQDEE
VNLLWTNTKVVSETEGIELREQSCAEQSLAATVPSANQLKPGSVQDSEEQLSSGGDSEDE
RLVIDDPVSPVSTTNRLPPTTATQLSPTHQQDTPRSPSASSPPPLATGTRRVARKAKVPG
GCDQLGQILAMQKAMLKPKPSNNQTQDPARPCSSQPAEPLSNPNPQSLVKPCVSNYLEST
QDGETYVDAPSQSGPIDNRKTVQQKRLLCYMLMSPPRGCVMISWGAEDEEDYSSPEEGNL
LYKLYSLQDLLLLVRSDVCLAHTRRLGTSNKAGWAPATRSGTHTHTHAGWAPATRSGTHT
HAQAGHQQQGLERTHTHTRRLGTSNKVVPVYVLSKMEYQLSYGVESLTKTEACRLWAETL
LHSSTVPYIGHISAHTSKVALLRKLPENWKPNASCDFKPAKSLNILHHLLKKITGLSEGH
YLIGHKAGEPFVTILKATEGRRIVREAYNLHQTHSSVPPPSALGPVPWVPLDPTLVLPFH
QKHSRPPCTFPPPDLQQHKARKGGAGEPGTPGPSKGKVGPANPTSSRGAKKKKNKGKRTQ
RRDKWMKRQIQRSIQQNSP
NT seq
3120 nt
NT seq
+upstream
nt +downstream
nt
atggagctgacatgggaggacgtcccgctcccagccccagacggtctattatttaacaaa
gacctatatgataagtactccctggcgccgaccatcaagggactgtgggctatcgctgtt
gtaagtcccacagtaaaggttgacgtgaaggaggagttagaggacacaacaggaccagcc
aagctcccctctacacagaaccagtcaaacagcagcagtaacataaatgatgagaggagt
ggcaccggagaaccctgttctgacagtcaggatgaacacggtgaccgtaaagatgatcac
ccgcctgctggagaggcagtctccagacaggaacccagtcaccctaggccctccggccag
gaccccggccttcccagccaggtaccagagttgttcccagagcccaggattccatacccc
tgtttctccagactcaccagtaaagaccagctgacatatctccatgtgctgaccagcaaa
cagcccagagaggcttctcagactctgttgctgcatgtgaacagtgagaggtcagagttc
atgaggtacctgcaggaagtggccaggatgtgtcctgacgactacaactacatatcccag
ggggccgctctctactcagaggagtacctgagagcctgtctagaccaaatgaggatgtat
ccccaactctatcagatccatgagataaccagcctcacaggaggaaacttctcttctagc
ctccagctcaactttgagaaacagctgctcactatgggcgaggtggtgatcacagaccac
aaagtggtgcctaatgaagcacagttggcatttgactacgagactgtttcatcagatatt
cctccagtcaagaaagcaaagctctcacactctggcatcagtactgacagtaatgcagag
aagctgagtggtcggtatgaaccccatgttgtcctgagtagagaaagtctggtcagactg
ctggacaaccacggtccggacttcactgatccctgggagttacctgtagtggtcaaaacc
aaccctgggagaggcagtagccggagtaagacggtgtacatcgaccctccactgctgcag
acagagatgactgtgagagagaggagtctgctgttccatgaggagagcatgaagctgtca
gtcaacaagactggaaccaagaatgtcttccacctcatgactgagactccagctatgaac
aaacaactacccgctgagagctcccagaggaggctggcctcgtttgagacctctggtctg
gactttggacttgatctcacagacttagaaacgtttggagaaacgactcagtcccccaag
aggctgaagacccatcatctacagaaagacttggtcagtcagcctaaaaccaagtctaaa
cagtacagtgggaccctgggtaaagaggtatctaaggccagcagaactcaggatgaagag
gtgaacttattatggacaaacacaaaggtggtttcagagacagaggggatagagctaaga
gagcagagctgtgctgaacaatcattggctgctactgtcccttcagccaatcagctgaaa
cctggctctgtacaggactctgaggaacagttatcctcaggtggagactcagaagacgag
cgcctggtgattgatgaccctgtatccccagtctccaccaccaacaggttacccccaacc
acggcgacccaactctccccaacacatcaacaggacactccccgatccccctctgcctcc
tcaccaccacccctcgccaccgggacaaggagagtggccaggaaggctaaggtaccaggg
ggctgtgaccagctgggtcagatcctagccatgcagaaggccatgctcaaacccaaaccc
tctaacaaccagacccaggacccagccagaccctgctcctcccagcccgcagaacccctc
tccaacccaaacccccagtcgctggtgaagccctgtgtgtccaactacctggagagtacc
caggatggagagacgtatgtcgacgccccttctcaatctggaccaatagacaacaggaag
actgtacaacaaaaacggctgctgtgttacatgttaatgtccccccccaggggctgtgtg
atgatctcatggggggctgaggatgaggaggactattcatctccagaggaaggaaacctg
ctgtataaactgtacagtctacaggacctgctgctgctggtgcggagtgacgtctgtctg
gcacacacgcgcaggctgggcaccagcaacaaggcaggctgggcaccagcaacaaggtct
ggaacacacacacacacgcacgcaggctgggcaccagcaacaaggtctggaacacacaca
cacgcgcaggctgggcaccagcaacaaggtctggaacgtacacacacacacacgcgcagg
ctgggcaccagcaacaaggtggtccctgtctatgtcctgtccaagatggagtaccagctt
tcttatggagtggagagtctaactaagactgaggcctgccggctgtgggccgagacacta
ctacactccagcactgtcccctatataggtcatatcagcgcccacacttcaaaggtagct
ctgctcaggaagctgccagaaaactggaaacccaacgcttcctgtgacttcaaaccagcc
aagtccctcaacatactgcatcatctgctgaagaagatcactgggttatctgagggccac
tatctgattggtcataaggcaggggagcccttcgtaaccatcttaaaggcaacggagggg
cggaggattgtccgagaggcctataacctgcaccagacccatagcagcgtgccccctccc
tctgccctcggccctgtaccctgggtaccgctggaccccacgctggtcctacccttccac
cagaaacacagccggccaccctgtaccttcccccctccagacctgcaacaacacaaggca
aggaagggcggggctggagaaccagggacgccgggtccaagtaaggggaaggtagggcca
gctaaccccacctccagccggggagcgaagaagaagaagaataaagggaagagaacacag
aggcgagacaagtggatgaagaggcagatccaacgctctatccagcagaacagcccttag
DBGET
integrated database retrieval system
