Oncorhynchus tshawytscha (Chinook salmon): 112255712
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Entry
112255712 CDS
T05605
Symbol
supt20
Name
(RefSeq) LOW QUALITY PROTEIN: transcription factor SPT20 homolog
KO
K21245
transcription factor SPT20 homolog
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
112255712 (supt20)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
otw03036
]
112255712 (supt20)
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
112255712 (supt20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spt20_SEP
Motif
Other DBs
NCBI-GeneID:
112255712
NCBI-ProteinID:
XP_042167441
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All DBs
Position
LG33:complement(42301910..42349945)
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AA seq
833 aa
AA seq
DB search
MQHVLEYALDRAEYIVESARQRPAKRRASSGGKKSLYHKLYQLYIEECDKEPELKKLRRN
VNLLEKLMCQESVSCLVVNLYPGNQGYSLMLRGKNGSDSETIRLPYEEGQLLEYLDAEEL
PPILVDLLEKSQVNIFHCGCVVAEVRDYRQSGNTKMPSFQSRHVLLRPTMQTLICDVHAM
TSDHHKWTQDDKFQLESQLLLATADPLCLDPSISVTCTANHLLYNKQKMNTHSMKRCFKR
HSRAALNRQQELSYLPMPPQLHLYDYLQRRKERKPAPSIDLKISKAGNCVDMWKQSNCQL
TVPKEIDVEKYAVVEKSVKLEESQPTVWPAEEVIDDYTFECEVGGKTQRTKVSIFQSVGD
PLVYGKIYCDKQPKAEEDSSALQILHPSFLIGSKIDASRFLSQYKGVYESDVKCQVKMSH
NSGFVGRNRLSPSRETEADGLSALVQSSGVLGKGVKHRPPPIKLPSASGSSSTGNLYSSA
QATSGLLKCPTPPPGTGPGSAKPQSLSRKHSVELGQGLQLGGQLGQVGLLSPVALSPMGT
TQRSGTPKPSTPTSTPCSTPHPPTPSSPSVPSRPLSPPHPWSPRPXLAPYPQQQLSLSQS
LPVMTIPLPTMGTSITTGTSSSQGMANPAGLNFINVVGSVCSPQTLMNSSQMLGPGLNLS
GLGGLMPTMQPTTQTGSPFGLNTSPGLRPLNLLQIPTGPLIFNSLQQQQLSQFSPQQSQS
ATSSPQQQGDMGDQGSDQGMGAQQTAVINLTGVGSFKSPQTAVLSQLGCGLDGSGPPLPS
PRLQQPQIQLQFLHQMQQQMAMRGAGPPGVSPRLHTASQPRSKRKRSTPQPHP
NT seq
2502 nt
NT seq
+upstream
nt +downstream
nt
atgcaacacgttttggaatatgcattggatcgggctgagtacattgttgaaagtgctcgt
caaaggccagcgaagaggagagcctcatccggagggaagaagagtttataccacaaacta
taccaactctacatcgaagagtgtgacaaagaaccagagctcaagaagctgcgtaggaat
gtgaacctgctggagaagctaatgtgtcaagagtcagtgtcgtgtctggtcgtcaacctc
taccctggcaaccagggatactccctcatgctccgcggcaagaatggatctgactctgag
acgatccgtttgccgtatgaggaaggccagctgttggagtacctggatgctgaggagctt
cctcctatcctggtggatctcttagagaagtcccaggtgaacatcttccactgtggctgt
gtggtagctgaggtccgagactacagacagtctggcaacactaagatgccctccttccag
agcagacatgtcctgctacggcccaccatgcagacactgatctgtgacgtccatgccatg
accagtgaccaccacaaatggactcaggatgataagttccagttggagagccagttactg
ctggccacagctgatcctctgtgtctggatccatctatctctgtcacctgtacagccaac
cacctgctctataacaagcagaagatgaacactcactctatgaaacgttgttttaagcgt
cactctcgggcggcgttgaaccgtcagcaggagctgtcctacctgcccatgcccccccag
ctgcatctctatgactacctgcagaggaggaaggagaggaagccggccccctcgatagac
ctgaagatctccaaggccggaaactgtgtggacatgtggaagcagagcaactgccagctg
actgtccccaaggagattgatgtggagaaatacgcagtggtggagaagtctgtgaagctg
gaggaatctcaacccactgtatggcctgcagaggaagtgatagatgactatacgtttgag
tgtgaggttgggggtaagacccaaaggaccaaggtgtccatcttccagtcggtgggcgac
cctctggtctacggaaagatctactgcgacaaacaacccaaagctgaggaggacagcagc
gcccttcagatcctacacccatctttcctaataggctcaaagatagatgccagtcggttc
ctgtcccagtataagggtgtgtatgagtcagacgtaaagtgccaggtgaagatgtctcat
aactcaggattcgtgggacggaaccggctctcacccagcagagagacagaggcggatggt
ctatcagccctggttcagtcgtcgggtgtgttggggaagggggtgaagcaccggcctccc
cctatcaaactaccctctgcgtcgggcagcagctccacgggtaacctgtatagttcagcc
caggctaccagtggtctccttaagtgtcctacgccccccccaggaacaggccccggctca
gccaagccccagtcactgagtaggaagcactctgtggagctggggcaggggttacagctg
ggcgggcagttaggacaggtggggttgttgtccccggtagccctatcacccatggggaca
acacagagatcggggaccccgaaaccctccacccccactagcaccccctgttccacccct
caccccccgactccctcctctccctctgtcccctcccgtcctctgtcccccccgcacccc
tggagccccaggcccntcctggctccgtaccctcagcagcagctgtccctgtcccagtcc
ctacctgtaatgaccatccctcttcccaccatgggaacctccatcacaacggggaccagc
tcctctcagggcatggctaaccctgctggactcaacttcatcaacgtggtgggatctgtc
tgcagtccccagactctgatgaattctagtcaaatgttgggtcctggtctcaacctgagt
ggtctaggaggactgatgcctaccatgcaaccaaccacacaaacagggagtccatttggt
ttgaacactagtccaggccttagaccactcaacctgctacagatccctacaggtcctctg
atctttaactctctgcagcagcagcagctctcccagttctctcctcaacagagtcagtct
gctacgtccagcccacagcagcaaggagacatgggtgatcaggggtcagaccagggtatg
ggcgctcaacagactgctgtcatcaacctgactggagtaggaagctttaagtccccacag
acagcagtgctgtcccagttaggctgtggtctggatggctctggtccccccctgccttct
ccaaggcttcagcagccgcagatacaattgcaattcttgcaccaaatgcagcagcaaatg
gctatgaggggggcggggcctccgggggtgtcgccacggctacataccgccagccaacca
agaagtaagaggaagaggagcacaccgcagccccacccctaa
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