Oncorhynchus tshawytscha (Chinook salmon): 112255756
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Entry
112255756 CDS
T05605
Name
(RefSeq) latent-transforming growth factor beta-binding protein 2
KO
K08023
latent transforming growth factor beta binding protein 2/3/4
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
otw04990
]
112255756
Domain-containing proteins not elsewhere classified [BR:
otw04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
112255756
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_CA
cEGF
TB
FXa_inhibition
EGF_3
EGF
hEGF
EGF_2
EGF_TEN
EGF_DL_JAG
Motif
Other DBs
NCBI-GeneID:
112255756
NCBI-ProteinID:
XP_042182217
LinkDB
All DBs
Position
LG08:29465568..29606890
Genome browser
AA seq
2129 aa
AA seq
DB search
MDRLWIAVLVVLTVALVRMCDCQKDSTGGRQEMWEQLRELARSQGHSAVGAKDAVPDIPS
RESLLNFSHNVSHSGRRAPVSSSSQRDNRYATAIKPVPAPSTEASLRADDATVPRDAARR
AATQLGTHHSSQQRPRISSRQSNKPSSTHTRRLAGPNVCGGHQCCSGWAVASGTNRCIKP
DCQPPCHNRGSCSRPHTCVCRSGFQGARCEEAAPEQVYIHNGGSLRRIQPGTNPFQREQP
RRRPTERQAIDNPSPRAQTIRPDTTRQPLQPVTQVRRGPADSSSPQQTGTSRTVKRYPSS
TGPITSNALPNGNGHDIGNANGHSSNGHRPTTNGHANNAVAPAGANLTSSLDRIKIVFTP
MVCRRVCSGGRCYNSCEKGDTTTVYSENQQQHQPAKTQGFRLFFCQIPCLNGGRCIGRDQ
CWCPTNSTGKFCHLPAPPPARPTLSRKDGSLAGHNSSSHSMYTLPLSNQQASLHPSMVNV
HIQHPHEAEVQIHQVARVKPGQRPPAAEGAHSVQQRSQPGNGIGNGHGHTRPHNRQNGYV
GRCFQETVDGQCGKPLPGLTKQDDCCGSVGASWGLNKCTECPTKPAYAVIANGQVECPKG
YKRMNMTHCQDINECLMNGICKNAECLNTRGSYRCTCKPGYMLDPARSHCVSDKAVSDQR
GMCYRSASAGICSLPLAQHITKQICCCSRVGKAWGTACERCPLPDTDHFKEICPAGHGYT
YSRSDVQISLRQLEEEELRRTGVSWEAQNPSHHQLPQQPAQPPQQLPHVPQIPQYPYHRQ
PHQPQHTQHPHQPQHPQHPQEIPHHPQTPQYPHQSHKPHHPQHPQELPQTPQIPQYPHTP
NNHNTLSIQTQTPSIQLGRPPASLKMWKYRPVATDSPLKYPVDVVEKVTPDSPINLGPES
EGKDTASINVATQVTDIDKCSITPTICGHGLCVPVQTGYTCYCDPGYKLSALQTNCIDVN
ECEGDPCGGKGRCVNTFGSYTCQCYSGYSQVITQNRKFCQDINECDMANKCQDGDCVNTE
GSYTCECKSGYAKSWKGPCEDVDECQGPSPCPSGRCVNTPGSFQCQACGPGFRAASGRCL
DVNECLDQSACAHGRCVNSEGSYSCSCYQGYQASLDNSSCQDVDECLLPGACLHGRCVNL
DGSHRCSCNPGYQSAPDGRACEDVDECATPVCPAGICTNSEGSYSCKNCRPGFQRSAGGQ
RCEDVDECSKADMCLGGVCANTEGSFTCTRCKDGYRVSQDRQRCEDIDECQSGSVCANGI
CLNSEGSFSCITCPSGYSVSLDGELCEDIDECELPTTCPKGTCTNTEGSFTCTTCGSGYR
VTEDGLECDDVDECLVANVCPGQLCRNSPGSFSCSSCGTGFTLSEDGSHCQDINECLSPG
VCPMGVCSNTEGSYSCMTCDLGFTLAPNGLTCEDINECEDRGLCLAGQCTNNPGSYSCSC
PSGLEMVDGTSCRDVDECQSGGICGDGDCLNTEGSYLCICPDGYTTGTTGTSDGIGCQDV
DECSKDGVCSHGQCLNTGGSYICLCETGFKYSVDTADCEDQNECKEFGSSVCGTWRCENT
IGSYRCFMGCQPGLYGQDNPDCDIDECVNETICGDHGFCENTDGSYRCQCDQGYSNPPGD
TGAHSCVDVNECEMSTALCGEALCENVDGSFLCICPSDNEEFDPITSQCRPQGEDAPPKP
ASPTEEQRKECYYNLNDANFCDNVLSRNTTKQECCCTVGAGWGDDCEIHPCPVPGREEYD
QLCPHGSGLLPQAVFSHSLEQQSFKDVDECKMFGPDICKNGRCSNNFSSYSCFCRTGFYY
DNIRLECVDYDECLTEKECVDGVCVNTAGSFDCFCSPPLVLDTTRRRCVSVNTTEETHEP
EEDIHLDICWQGLVDERMCAQPLIGRRTTYTECCCLYGVAWSEQCAFCPMRDSDDYAAVC
NLPRRGGSDSLRERPGYEYGPGVEGPDGPYVPPYWDNYGGGPITGPGGTYYNPEDTQGIP
LFTDNTNDYGSREGDIEPPLRVPVHRPREFQPRPVDSYNDRFDGFEGLRAEECGILNGCE
NGRCVRVREGYTCDCFDGYELDLTKMACIDINECEDISDNVALCKNGACTNTEGSYKCIC
LPGFQASAKPHECIPEVPVDGFRERVAGK
NT seq
6390 nt
NT seq
+upstream
nt +downstream
nt
atggaccgtttatggattgcagttttagtggttctaaccgttgcactagtacgaatgtgt
gactgccagaaggactcaacaggtggtagacaggagatgtgggagcagctccgggagcta
gcgaggagccaaggtcactccgcagtgggagctaaggacgctgtccccgacataccatcc
agagaaagcttgctcaacttctctcataatgtctcgcactccggtcgccgggctccggtg
agctcatcatctcaacgagataacaggtacgcgacggcaattaaaccagttccagctccc
agtacggaagcttccctccgggcggatgatgccacggtcccacgagatgctgcgcgtagg
gccgcgacacagctcggcacccatcactcatcacagcaaagaccccgaatcagttccaga
cagagcaacaaacccagctcaacgcataccaggcgccttgcagggcctaatgtatgtgga
ggtcaccagtgctgctctggatgggctgtggcatctggcaccaaccgctgcataaagccc
gactgccagcccccctgccataaccgcggctcctgcagtaggccccacacatgtgtgtgc
cgctcggggttccagggggcccgctgcgaggaggcagcaccagagcaggtgtacatccac
aacggagggtccctgaggcgcatccagccaggcactaaccccttccagagagagcagccc
aggaggagacctacagagaggcaagccatagacaaccccagccccagggcccagacaatc
agacctgataccaccagacagcctcttcaacctgtgacccaggtgaggcgaggaccagcc
gactcatcgtctcctcagcagactgggacgtctcgcaccgtcaagcgatacccatcgtcc
actggccccatcacatccaacgctctgcctaatgggaacggacatgacattgggaacgcc
aatggacactcaagtaacggccacagacccaccaccaatggccacgccaacaatgcagtg
gcgccagcaggggccaacctcacttccagccttgaccgcatcaagattgtcttcaccccc
atggtgtgccggagggtgtgcagcggcggccgctgctacaacagctgtgagaagggtgac
accaccaccgtctacagtgagaaccagcagcagcatcagccggcaaagacccagggcttc
agactcttcttctgtcagatcccctgtctgaacggtgggcgctgcattggcagggaccag
tgctggtgcccaacaaactccactgggaagttctgccacctcccagccccccctcctgcc
cgacccaccctcagcaggaaggacggcagcctggccggacacaactcgtcctcccactcc
atgtacaccctgccgctgtccaatcaacaagcctctctacacccatccatggtgaatgtc
cacatccagcacccccacgaggctgaggtgcagatccaccaagttgcccgggtcaagcct
ggccagagaccccccgcggctgagggggctcactctgtacagcagcgctcccaacctggc
aatggcatcggcaatgggcatgggcacaccagaccacacaaccggcagaacggatacgtt
gggaggtgcttccaagagaccgttgatggacagtgtgggaagcctcttccgggcctgacc
aaacaggatgactgctgtggaagtgtgggtgcctcatggggcctgaacaagtgcacagag
tgtccaaccaaaccagcgtatgcagtgattgcgaacggacaagtggaatgccctaagggt
tacaaaaggatgaacatgactcattgtcaagacatcaatgagtgtctgatgaacgggatc
tgtaagaacgctgagtgtctgaataccagaggaagctacagatgcacctgtaaaccaggc
tacatgctggaccctgccaggagccactgtgtctcggacaaggctgtgtcggaccagagg
gggatgtgttaccgctcagcgtcagcggggatctgctctctgcctctcgctcagcacatc
accaaacagatctgctgctgcagccgtgtgggcaaggcctggggcacggcctgcgagagg
tgccctctgccagacacagaccatttcaaggagatctgtcccgctggccacggctacaca
tactcgcgctccgacgtgcagatctccctgagacagctggaagaagaggagctgaggagg
actggcgtttcctgggaggcccaaaaccctagccaccaccaactgccccagcagccagct
caacccccgcagcagctgccccacgtcccacagatcccacagtacccctaccaccgccaa
ccacatcaaccacagcatacacaacacccccaccaaccacaacacccacaacacccacag
gagataccccaccacccccagaccccacagtaccctcatcaatcccacaaaccccaccat
ccacagcacccccaagagctcccccagactccccagatcccccagtaccctcacaccccc
aacaaccacaacaccctctccatccagacccagacacccagcatccagctggggagaccc
ccagccagcctcaagatgtggaaatatcgtcctgttgcgactgactccccactgaagtac
ccagtagatgtggtagagaaagtgactcctgactctcccatcaacctggggcctgaatct
gagggcaaggacacagcctccatcaatgtggccactcaggtcacagatattgacaagtgc
tccatcactccaaccatatgtggccatgggctgtgcgtgccagtgcagacaggctacacc
tgctactgtgaccccggctacaagctgagcgcgctccagaccaactgcatcgatgtgaat
gagtgtgagggggacccttgtggagggaagggccgttgtgtgaacacctttggctcctac
acctgccaatgctacagcggctacagccaggtcatcacccagaacaggaagttctgccag
gatataaatgagtgtgacatggccaacaagtgccaggatggtgactgtgtcaacacggag
ggatcttacacctgtgaatgcaagagtggctacgccaagtcctggaaagggccgtgtgaa
gacgtagatgagtgccagggccccagtccgtgccccagtggaaggtgtgtcaacacccca
ggctccttccagtgccaggcctgtggccccgggttcagggctgccagcgggagatgtctg
gatgtcaacgagtgtttggaccaatcggcgtgcgcccacggtaggtgtgtcaactccgag
ggctcctacagctgcagctgttaccaaggataccaggcttctctggacaacagcagttgc
caagatgtggatgagtgtctgctccctggagcctgcctccatggcaggtgtgtcaatctg
gatggctcccacaggtgcagctgtaaccctggttaccaaagtgctcctgacggcagggcc
tgtgaagatgttgacgaatgtgctacacctgtgtgccccgcgggaatttgcaccaattcc
gaaggttcctactcatgcaagaactgccgacctggattccagcgatcagcgggtggacag
agatgtgaagatgtggatgagtgctccaaggcagacatgtgtctgggaggggtgtgtgcc
aacacagagggctccttcacctgcacccgctgtaaagacggatacagggtgtcccaggac
aggcagaggtgtgaggatattgatgagtgccagtctgggtctgtgtgtgctaatgggatc
tgtctgaactctgagggctccttctcctgcatcacctgtccctcaggctacagcgtctcc
ctagacggagagctgtgtgaagatattgatgagtgtgagctgcccactacgtgccccaag
ggaacatgcaccaacactgagggttccttcacctgcaccacctgtgggtcaggctataga
gtgactgaggatgggctggagtgtgatgatgtggacgagtgcttggtggctaacgtgtgc
ccaggccagctgtgtcggaacagtcctggatccttctcctgcagcagctgtgggactggc
tttaccctgtctgaggacggctcccactgccaggacataaatgagtgcctgtccccaggg
gtctgtcccatgggcgtttgcagcaacacagagggctcctactcctgtatgacctgtgac
cttggcttcacgctggcgcccaatggactcacctgtgaagacatcaacgagtgtgaggac
cgcggtctgtgtctggcaggacagtgtaccaacaaccctggttcatacagctgctcctgt
ccatcgggcctggagatggtggacgggacatcttgcagagatgtggatgagtgtcagtct
ggggggatctgtggagatggggactgtctaaacacagagggttcctacctctgcatctgc
cctgatggatacaccacaggcaccacaggcacctcagatggaattggctgccaagatgtt
gatgagtgcagcaaggatggcgtgtgctcccatggtcagtgtctaaacacgggtggctcc
tacatctgcctttgtgagactggcttcaagtactctgtagacacagccgactgtgaggat
cagaatgagtgtaaggagtttggtagctcagtgtgtggcacctggcgctgtgagaacacc
attggctcataccgatgcttcatgggctgccagcctggcctgtatggacaggacaaccca
gactgtgatattgatgagtgtgtgaatgagaccatctgtggggaccatggcttctgtgag
aacacagatggctcctaccgttgtcagtgtgaccagggctacagcaacccccctggtgat
accggggcccatagctgtgtggacgtgaacgagtgtgagatgagcacggcgctgtgtgga
gaggccctgtgtgagaatgtggatggcagcttcctgtgcatctgccccagcgacaatgag
gaatttgatcccatcaccagccagtgccgcccgcagggtgaagatgctcctcctaagcca
gcctcacccactgaggaacagaggaaggagtgttactacaacctgaacgatgctaacttc
tgtgacaacgtgctgtctcgcaacaccaccaagcaggagtgctgctgcacggtgggggcc
ggctggggggacgactgtgagatccacccctgcccagtcccagggagagaggagtatgac
cagttgtgtccacatggaagtggtcttctgccccaagctgttttctcccacagcctggaa
cagcagagtttcaaagatgtggatgagtgtaagatgtttgggccagatatctgtaagaat
ggccgttgctctaacaacttctcctcgtactcctgcttctgccgtacaggcttctactac
gacaacatccggctggagtgtgtggattatgacgagtgcctgacagagaaggagtgtgtg
gatggggtgtgtgtgaacactgccggctctttcgactgtttctgcagtccccctctggta
ctggacaccacccgccgtcgctgcgtcagcgtcaacaccaccgaggagactcatgagcct
gaggaggacatccacctggacatctgctggcagggcctggtagatgagcgtatgtgtgcc
cagcccctcatcggcaggaggaccacctacacggagtgctgctgtctctatggagtggcc
tggagcgaacagtgtgccttttgccccatgagggactctgatgactacgcagcagtgtgt
aacctgccaaggagaggggggtctgacagtctacgagagagacctggctatgagtacggt
cctggggttgagggtcctgatgggccctatgtccccccctactgggacaactatggagga
gggcccattactgggcctgggggtacctactacaacccagaggacacccagggcatccct
ctgttcacagacaacaccaacgactatggctcccgagagggagacatagagccgccacta
cgtgtccctgtccaccggccaagagagttccagcctcgccctgtagactcatataatgac
cgctttgatggcttcgagggcctgcgagcagaggagtgtggcatcctgaacggctgtgag
aatggccggtgtgtccgcgtgagggaaggttacacctgtgactgctttgatggatacgag
cttgacctcaccaaaatggcctgcatcgacataaacgagtgtgaggatatcagtgacaac
gtggcgctgtgtaagaacggggcctgtaccaacaccgaggggtcgtacaagtgcatctgc
ctgcctggcttccaggcctctgccaagccccatgaatgcatcccagaggtcccagtggat
ggctttagagagagagtggcagggaaatga
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integrated database retrieval system
