Oncorhynchus tshawytscha (Chinook salmon): 112255783
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Entry
112255783 CDS
T05605
Name
(RefSeq) nesprin-3 isoform X1
KO
K21761
nesprin-3
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
112255783
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
otw03036
]
112255783
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Centrosome formation proteins
LINC complex
112255783
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KASH
MAP6
DEC-1_N
SesA
Motif
Other DBs
NCBI-GeneID:
112255783
NCBI-ProteinID:
XP_042181214
LinkDB
All DBs
Position
LG08:15089818..15141072
Genome browser
AA seq
1570 aa
AA seq
DB search
MTHQEQQEILFRESLEAAMSWMKAVQERLRLNDNTQGPRAALEARLRETEKIHQSEHEGH
LKFDKVLVAAEVLLQNGNQETRNITHARLKELKALWEETCTYIIHCHSRIEWVWLHWSEY
LKAYEEFEMWLVSVCRSLEPEVELQLGVKEKLWQVDNQRVLLSDVQNQALLLERLVDEAA
ALNNRIQDPSVDQEAQERLQLVYNSIRDKADERLSVLQKMAEEHQMYQRDVLKFQAWLVS
KTKELNTLTETEDTAENKLLALQTLDDNVASEERTLQHIEVMAEAVRANTSPGGADVVVE
EAEELRLDWQRLRQSLCEAGESLKISLESRSQYQSRCQRLGEDIGQLRGLLHRLTRDLET
AREGDRTGDLETAREGDRTRDLETAREGDRIEEQMVGQWRKYMNIRNTLLAEESQVERLK
AQLKELFRFSQDSQHLSDDVLAVVKEQQSVKCRAMKLCVESELGLRQVLQDPLHGFSQWS
QVVSQVLESSAEVSEFSHVAMLVQNIQRLLKHSLQLQEQLRLMLLKRDLLCSVFGSDSAE
SLMTALNDTVRKRELLHNQLLQRKARLQGLISRTKDFGDACKSIRNKLTLLRERLTSADS
LQPDILAKKSQSDQQRVIKKDLEDCEAHITALETLVSSSSANRTQFERLYGDWRILYKSV
RVKVKESEESIGGHESFHVSLLNVEKWLMIMRQKLESYRSSTGEWSLDNRQQEAERALGE
FPEKELQLHQTEVQGQGVLERTSVEGRVHILRDMKHLRESWMALHDLSLNLFRLLNGHSS
EDPDLDTQRERVRGQAGERPGPGRELFPGEGGDMIKGSGSSSSREGAPERSSGEGHGVWL
SQTSGVGVGRGGRTGLGGRLERGEGGESFGAEEGIWVEGAFEGSMEVMDLSEHRERQGRD
RQTLGQQLSPMTLTLAGSQRRGQGGGSGDRDREREKERGGGEHSLGVEEVDSSIVWRGGY
GQRGEEGTTGMTSGHTGGRSTHGGGGLVVVDSGSRVSRVVGDSGSRVSGVVGDSGSRVSG
VVGDSGSRVSGVVGDSGSRVSGVVGDSGSRVSGVVGDSGSRVSGMVGDSGSRVSGVVVDS
GSRVSGVVGDSGSRVSGVVGDSGSRVSGVVGDSGSRVSGVVGDSGSRVSGVVGDSGSRVS
GVVWDSGSRVSGVVGDSGSRVSGVVGDSGSRVSGVVGDSGSRVSGVVGDSGSRVSGVVGD
SGSRVSGVVGDSGSRVSGVVGDSGSRVSGVVGDSGSRVSRVVGDSGSRVSGVVGDSGSRV
SGVVVVDVSESSRSGQTEEWVDGQRSRGMAESLAMELDVGLESGSGLEHGSRGNYDKGTG
GMRDHSEGGHLRHRGFFPPIKTRMEDSGMDGLTLSFQQGSARKPSGRLQGSSHHTTADVG
ASLSAGDYEDRRREFEAWLQKENDTLSGILSTEGLLSTKELKIRQNTLMTLRSSVDWGQE
QFQLLLMAWAVAGARADRGAEDVGMEEIRYRWMLYKSKLKDVGDLKAHLNVKQGAGAAGR
EEHTRTAKEKTPGLLYRVCRVALPLWLLLLALLLFAFFLPWMDEASSCSLSNNFARSFNI
MLRYHGPPPT
NT seq
4713 nt
NT seq
+upstream
nt +downstream
nt
atgactcatcaggagcagcaggagatcctgtttagggagagcctggaggcagctatgtcc
tggatgaaggccgtccaggagcggctccggctcaacgacaacacccagggtccccgggcc
gccctggaggccagactcagagagacagagaaaatccaccagtcggagcacgagggtcat
ttgaagtttgacaaggtgcttgtggctgcagaggtcttactgcagaacggtaaccaggag
acgaggaacatcacccatgccagactcaaagaactcaaagcattatgggaggagacctgc
acctacatcatccactgccacagccgtatagagtgggtgtggctgcactggagtgagtac
ctgaaggcctatgaggagtttgagatgtggctggtcagcgtgtgtcgcagtctggagccg
gaggtggagctgcagctgggggtgaaggagaaattgtggcaggtagacaaccagcgcgtc
ctgctgagtgacgtccagaaccaggcactgttgctggagaggctggtggacgaggctgca
gcgctgaacaaccgcatccaggatcccagtgtggaccaggaagcacaggagagactccag
ctggtctataacagcatacgggacaaggctgatgagaggctgtcggtgctgcagaagatg
gctgaagagcaccagatgtaccagagagacgtcctgaagttccaggcctggctggtgtcc
aagactaaggagctcaacaccctcactgagacagaggacacagccgagaacaaactccta
gccctacagaccctggatgacaacgtggccagtgaggagaggacgctgcagcacattgag
gtcatggcggaggcagtgcgggccaacacgtcccccgggggggcagatgtggtggtggag
gaagcagaggagctgcgtctggactggcagaggctgagacagagcctgtgtgaggccgga
gagagcctgaagatcagcctggagtctcggagccagtaccagagccgctgccagcgtcta
ggggaggacatcgggcagctccggggcctgctccacagactgaccagagacctggagaca
gccagggagggagacaggaccggagatctggagacagccagggagggagacaggaccaga
gacctggaaacagccagggagggagacaggattgaggaacagatggttgggcagtggagg
aaatacatgaacatccggaatactttattggcagaggaatcccaggtggagcgccttaag
gcccagcttaaagaactcttccgcttttcccaagattcccagcatctctctgacgacgtc
ctggctgtggtgaaggaacagcagagtgtgaagtgtcgtgctatgaagctatgtgtggag
tcagagttggggctgagacaagtgctgcaggaccctctgcatggattctctcagtggagt
caggttgtctctcaagtgctggagtcttctgctgaagtgtctgagttctcacacgtcgcc
atgctggtgcagaacatccagaggttgctgaagcacagtctgcagctgcaggagcagttg
cgtttgatgctgttgaagagagatctgctgtgttcagtgttcggctcagacagcgcagag
agtctaatgacagcgctcaatgacaccgtgaggaaaagggagttactgcacaaccagctg
ctgcagaggaaagcaagactgcagggtttgatctcaaggacaaaggactttggggacgcc
tgcaagtcaatcaggaacaagctgaccctgctgagagagagactgacctcagcagacagc
ctccagccagacatactggccaagaagagccagtcagaccagcaacgggtgatcaagaag
gacttggaggactgtgaggcccacatcacagctctggagactctggtgtcgtctagctct
gctaacaggacacagtttgagaggctttacggggactggagaatcctttacaagtccgtc
agggtaaaggtgaaggagagtgaggagagcatcggggggcacgagagtttccacgtgagc
ctgctaaacgtggagaagtggttgatgattatgaggcagaagctggagtcctaccgcagt
tctactggggagtggagcctggacaacagacagcaagaggctgagagggcactaggtgag
ttcccagagaaggaactgcagctgcaccagacagaggttcagggccagggggtgctggag
aggacctctgtggagggccgggtgcacatcctcagggacatgaagcacctgagggagtcc
tggatggccctccatgacctcagcctcaacctcttcaggctgctgaatgggcacagctct
gaggaccctgacttagacacccagagggagagggtgagaggccaggctggggagaggcca
ggcccaggcagggagctctttcctggggagggaggagacatgatcaagggtagtggctcc
agcagcagtagggagggtgctccagagagatcctcaggagagggccatggggtctggctc
tctcagacctctggagtaggggttgggagagggggaagaacagggttaggaggaaggttg
gagcgaggggaaggaggggagagttttggagcggaagagggtatttgggtcgagggagcg
tttgagggcagtatggaggttatggatctctctgaacatagggagagacagggcagggat
cgacagactcttggtcaacaactgagtcctatgacgttaaccttggcaggcagtcagaga
cggggacagggcggtgggagtggggacagggacagggaaagggagaaggagaggggtggc
ggtgagcacagcctgggtgtagaggaggtggactcctccatcgtttggagaggggggtac
ggtcagaggggagaggagggaaccacagggatgacatcaggccacacagggggcagaagc
acccatggtggaggaggattggtggtggtggactctggctccagggttagcagggtagtg
ggggactctggctccagggttagcggggtggtgggggactctggctccagggttagcggg
gtggtgggggactctggctccagggttagcggggtagtgggggactctggctccagggtt
agcggggtagtgggggactctggctccagggttagtggggtggtgggggactctggctcc
agggttagcgggatggtgggggactctggctccagggttagcggggtagtggtggactct
ggctccagggttagtggggtagtgggggactctggctccagggttagtggggtagtgggg
gactctggctccagggttagcggggtggtgggggactctggctccagggttagcggggta
gtgggggactctggctccagggttagcggggtggtgggggactctggctccagggttagc
ggggtggtgtgggactctggctccagggttagtggggtagtgggggactctggctccagg
gttagcggggtggtgggggactctggctccagggttagcggggtggtgggggactctggc
tccagggttagcggggtagtaggggactctggctccagggttagtggagtagtgggggac
tctggctccagggttagcggggtggtgggggactctggctccagggttagcggggtagta
ggggactctggctccagggttagtggagtagtgggggactctggctccagggttagcagg
gtagtgggggactctggctccagggttagcggggtggtgggggactctggctccagggtt
agcggggtggtggtagtagatgtgtctgagtccagccgtagtgggcagacagaggagtgg
gtggatgggcagaggtccagaggaatggctgaatccctggccatggagttagatgtgggg
ttagagtcaggctctgggttagagcacggcagcagaggtaactacgacaagggaacaggt
ggaatgagagaccacagtgaagggggacatctgcgacacagaggctttttcccgcctatc
aagaccaggatggaggattcaggcatggatggtctcactctgtcattccagcaaggctct
gctagaaaaccctctggaaggctacagggctcaagtcaccacaccacggcagatgttggg
gcatccctgagtgcaggggactatgaggacaggaggagggagtttgaggcctggctacag
aaggagaacgatacactctcagggattctgagcacagagggactgctgagcaccaaagaa
ctcaagatcaggcagaacacactcatgaccttgcggtccagtgtagactggggtcaggag
cagttccagctactactgatggcttgggctgtagccggggccagggctgaccgtggggct
gaggatgtgggcatggaggagatacgttatcgctggatgctctacaagtccaaactgaag
gatgtaggagacctcaaggcccatttgaatgtcaagcagggtgctggtgctgctggccga
gaggaacacaccaggacagctaaggagaagactccaggcctgctgtaccgtgtgtgtcgg
gtggccctgcccctctggctcctgctgttggctctgctcctctttgccttcttcctgccc
tggatggacgaagcctccagctgctctctgtccaacaacttcgcccgctccttcaacatc
atgctccgttaccacggacctccacccacatag
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integrated database retrieval system
