Oncorhynchus tshawytscha (Chinook salmon): 112255793
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Entry
112255793 CDS
T05605
Symbol
sec31b
Name
(RefSeq) LOW QUALITY PROTEIN: protein transport protein Sec31A
KO
K14005
protein transport protein SEC31
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
112255793 (sec31b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112255793 (sec31b)
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
otw02044
]
112255793 (sec31b)
Membrane trafficking [BR:
otw04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
112255793 (sec31b)
Secretion system [BR:
otw02044
]
Sec (secretion) system
Eukaryotic Sec-SRP protein
112255793 (sec31b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_RIG_2nd
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_CAF1B_HIR1
WD40
Beta-prop_TEP1_2nd
WDR55
TPR_Sec16
Beta-prop_EML
EIF3I
Beta-prop_EIPR1
Beta-prop_WDR35_TULP_N
WD40_MABP1-WDR62_2nd
Beta-prop_HPS5
MIOS_WD40
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_DCAF4
Prp18
MukF_M
Beta-prop_WDR11_1st
Motif
Other DBs
NCBI-GeneID:
112255793
NCBI-ProteinID:
XP_042174993
LinkDB
All DBs
Position
Unknown
AA seq
1273 aa
AA seq
DB search
MRLKEIQRTAHPAWSPAPHHPICLALGTSAQQLDASFNTTAALEIFQVDFADPSLGMKLK
GSLPTSNRLHSLVWVNFGAGEDGLGGRLIGGSDNGTVTVYSPEAIVTSGAEAIIGQSDKH
TGPVRALDFNPFQSNLLASGANDSEIYIWDLNNFSNPMTPGTKSQLCEPPEDISVVSWNR
QVQHILASANPSGKAVVWDLRKNEPIIKISDHSNRMHCSGMLWHPEVATQLVLASEDDRM
PVIQMWDLRFATSPLKVLENHTRGLLSIAWSQADPELLLSSAKDNRILCWNPNTGEVIYE
LPTTNQWCFDIQWCPRNPALLSAASFDGWISVYSVMGGSLEAQQQSRADQISSSFDTMDP
FGTGQVLPPLQVPQPTPQTTLVAPLKKPPKWVRRPVGASFAFGGKLITFESPKAPVQSPQ
PVPVPRQVFVSQVTTETELLQRSRELQAALQSGSLSDYCQAKIHKAPTDSEQDIWRFLLV
NFEDEARVKFLRLLGFSKEDLERKISTCLGKNLQPNGHGVDANDLAEKIQLLSTQRSEES
GDEVDSTKTLGSSSPSDFFSQIPPQPQDKEKKMSFPIPVSADADGLISQALLVGNFEGAV
DLCLNEGRYAEAILLAISGGQELLQKTQQTYLDEQRNSISMLISSVVTQNWGDIVQSCAL
DNWKEALAALLTYAHPKEFAHLCETLGSRLEGERTEKRCLQACLCYICSGNIEKLVECWA
LQRDCSSPLVLEDLVEKMMVLRKSVERLRNSEVAVQSPILADKLTHYAGLLASQGSLATA
LSYLPDTSDQACIMMMRDRLFHAQGEGGAAAGQQPPPFPYNRVRVTGGDPAPAQAPAVPV
QAQPPTQTPGPYQPPLPVMSVGGQPPPPVMSVGGQPPPPVMSVGGQPPPSYGVLPPSSPA
PPPSGLPRTGLRPAYPQHPATAPGFSPLQPFQPQQQPMSAGLGGPGLSAFPPGPAMPGSS
LSGPPLPPFSAPGGLPTMPSPGPPPSGFTPTSLPSGPMPPSYQQPGAPVGMYPPGSHLHS
QGPPAGPPSGPYPPLGPGYPQGGPGAPAVKSFSAPSVAPPPTGYFPWLSTPLVDDDEGQD
GWNDPPAVRGGSRKKKVVPDNYTPPAPITAPVMGGFPMEGHHHQPQGQQGHDPSRTQQFP
PGAPQEPSVQLLQALPAERVEQREIPTEHMVLKQTFDSLVQRCQLAAQDPQTKRKLEDAS
KRLGYLYDKLREQTLSNNILGGLHEISRCVAGQNYQRGLEVHTAVVTSSNFSEIQAFMPI
LKVVMTIANKLGV
NT seq
3822 nt
NT seq
+upstream
nt +downstream
nt
atgaggctgaaagagatccagaggaccgctcatccagcatggagccctgccccccaccac
cctatctgcctggctttaggcacgtcagctcagcagctggatgcgtcattcaacaccact
gccgccttggaaatattccaggtggattttgccgatccttccctgggcatgaagctcaag
gggtccctacctacttctaacaggctccatagtctggtgtgggtaaactttggagcagga
gaagacggtttgggagggagactgattggaggcagtgataatggcacggtaacggtgtat
agcccagaagccatcgtaacatcaggggcagaggcaataataggacagtctgacaaacac
actgggcctgtcagagcactagacttcaacccctttcagagtaatctgttggcgtcaggt
gcaaacgattcagagatctacatctgggatttgaacaatttcagcaatccaatgacaccc
gggacaaagtcacagctttgtgagcctcctgaagatatcagtgtagtgtcgtggaacaga
caggtgcaacacatcctggcctctgcaaaccccagtgggaaagcagtggtctgggacctg
aggaagaacgagcccatcatcaagattagtgaccacagcaaccggatgcactgttcaggg
atgctctggcaccctgaggtggccacccagttggtcctggcctcagaagatgaccgcatg
ccagtcattcagatgtgggacctgcgctttgccacgtcccctctcaaagtcctggagaac
cacacaaggggacttctgtccatagcgtggagccaagcagacccagagctgttgctcagt
agtgctaaagacaacaggatcctctgctggaacccaaacactggagaggtgatctatgaa
ttaccaacgaccaatcagtggtgctttgacattcagtggtgtcccaggaacccagcgctg
ctgtcggcggcctcgtttgacggctggatcagtgtgtacagtgtgatgggaggaagcctg
gaggcccagcagcagagcagggctgatcagatctcctcgtcctttgacaccatggatccg
tttgggacaggccaggtgctgccccctctgcaagttccccaacccacccctcagaccacc
ctagtcgctccgctgaagaagccccccaagtgggttcgtaggcccgtaggagcctcattc
gcttttggtgggaagctgatcacctttgagagtcctaaggctccagtccagagcccacag
cccgtccctgtccccaggcaggtgtttgtgagccaggtcaccacggaaacagagctcctc
caacgttccagagagctgcaggctgctctgcaatctggatccttgtcagactactgccag
gccaagatccacaaggcccccacagactctgaacaggacatatggaggtttctcctggtc
aactttgaagatgaagcccgggtcaaattcctgagacttttgggtttcagcaaagaggat
ttagagagaaagatatccacctgcttggggaagaacctgcagcctaacggacatggagtg
gatgccaacgatctggctgagaagatacagcttctctctactcagaggtcagaagaatcc
ggggatgaggttgactccaccaagactctgggttcatcctcgccctctgactttttcagt
cagatcccaccacaaccacaagacaaggagaagaagatgagcttcccgatccctgtgtca
gcagatgcagatggtctgatcagccaggctctgctggtgggaaactttgagggagcggtg
gacctgtgtctgaacgaggggcgctacgctgaggccatcctgctggcgatcagtggagga
caggagctactgcagaagacccagcagacatacctggacgagcagaggaacagcatctct
atgctgatctcatccgtggtgacccagaactggggagacatcgtgcagagctgtgccttg
gataactggaaggaggctctcgctgctctcctaacctacgctcaccccaaagagtttgct
catctgtgtgagaccctggggtcgcgtctggagggggagaggacagagaaacgctgtctg
caggcatgtctctgttacatttgctctgggaacattgagaaactagtggaatgctgggcc
ctgcagagggactgctcatctcccctggttttagaggacttggtagagaagatgatggtt
ctgcgtaagtctgtggagcgtctgaggaacagcgaggtggctgtacagagtcctatcctg
gctgacaagctgactcactacgctggtctcctagcttcacaaggcagcctggctacagcc
ctgtcctacctgccagacacctcagaccaggcttgcatcatgatgatgagagaccggctg
ttccacgcccagggagagggaggagctgcagcggggcaacagcccccaccgttcccttac
aacagagtcagggtgactgggggcgaccctgcccccgctcaggcccctgctgtccccgtc
caagcacaaccaccaacacagacaccggggccctaccagcctcctcttcctgtgatgtca
gtgggtggccagcctcctcctcctgtgatgtcagtgggtggccagcctcctcctcctgtg
atgtcagtgggtggccagcctcctccttcgtatggcgttctgccaccctcctcccctgct
cctccaccgagtgggctgccacgtacaggactacggccagcctaccctcaacatcctgcc
acggccccagggttctctccactccagccattccagccacaacagcagcccatgtctgca
ggactaggtggccccggcctctctgccttccctccaggacccgctatgccaggctccagc
ctatctggaccccctctgcctccgttctctgcccctggcggcctccccaccatgcccagc
ccagggccacctccgtcaggcttcacccccacctcgctcccttcaggccccatgccaccc
agctaccagcagcctggggcccccgtcggcatgtacccaccagggtctcacctccacagc
cagggcccacctgcaggtcccccctctggtccgtacccacccctgggacctgggtaccca
caaggaggtcctggagccccggccgtcaagtccttctctgctccgtcggttgctcctcct
cctacagggtacttcccttggctgagtactccccttgttgacgatgatgaaggacaagat
ggctggaatgacccaccagcagtacgagggggttctaggaagaaaaaggttgtcccagac
aactacacccctccggctcccatcaccgcccctgttatggggggtttccccatggagggc
catcatcatcagccccaaggacagcagggccacgaccccagccgcacgcagcagttcccc
ccaggggcccctcaggagcccagcgtacagctcctccaggcgctgccggctgagagggtg
gagcagagagagatccctacagagcacatggtcctcaagcagaccttcgacagcctggtt
caacgctgccagctagccgcacaagacccacaaacaaaaaggaaacttgaggatgcatcg
aaacgccttgggtacctgtatgacaagctgagagagcaaacgctgtctaacaacatcctg
gggggtttacatgagatcagccgctgtgtggcgggccagaactaccagcgtggcctagag
gtccacactgctgtggtcaccagcagcaacttcagcgagatccaagccttcatgcccatc
ctcaaagtggtcatgaccatcgccaacaagctgggcgtctga
DBGET
integrated database retrieval system
