Oncorhynchus tshawytscha (Chinook salmon): 112255824
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Entry
112255824 CDS
T05605
Symbol
capn3a
Name
(RefSeq) calpain-3 isoform X1
KO
K08573
calpain-3 [EC:
3.4.22.54
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
112255824 (capn3a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
otw01002
]
112255824 (capn3a)
Enzymes [BR:
otw01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.54 calpain-3
112255824 (capn3a)
Peptidases and inhibitors [BR:
otw01002
]
Cysteine peptidases
Family C2: calpain family
112255824 (capn3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_6
EF-hand_7
EF-hand_1
EF-hand_8
Motif
Other DBs
NCBI-GeneID:
112255824
NCBI-ProteinID:
XP_042181013
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All DBs
Position
LG08:complement(3457774..3509667)
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AA seq
711 aa
AA seq
DB search
MPYTPSGFFCDRLIRERERRDGEGSLSKPLRFSGQDFTTLKQECLTKKCLFEDDTFPASV
ESLGYKELGHKSNKVKNIVWRRPKEICENPQFIVGGASRTDICQGDLGDCWLLAAIACLT
LNEKLLYRVVPQDQSYSEGYGGIFHFQFWRYGDWVDVVIDDRIPTFNNQLVFTKSAERNE
FWSALLEKAYAKLHGSYEALKGGNTTEAMEDFTGGVTEFYEMKEAPKELYKIMKKALERG
SMMGCSIDSLVPARFETRTVTGLVKGHAYSVTAVEESQHKASKVRLVRLRNPWGQVEWNG
PWSDNSKEWVSLSKGEKDQLQHQSAEDGEFWMSFEDFKKNYTKIEICNLTPDALEDDKIH
KWTVSVNEGRWVRGCSAGGCRNYPDTFWTNPQFRLCLLEEDDDSEDNEVACSFVVSLMQK
NRRKERKLGANLFTIGFAIYEVPKEMHGNKQHMQKDFFLFNSSKARCKSYINLREVTQRF
RLSPGEYVIIPSTYEPHQEGEFILRVFSEKRNTSEEIENRIEADHTVPAPANAGEESEED
QQFRSLFQQIAADVSTEMEVTANELKNVLNRVVSKHKDLNTEGFSLECCRSMIALVDMDG
TGRLSLQEFRHLWNKIKQWQGIFRHYSSDQAGIINSYEMRNAINDAGFRLNNQLYDIITM
RYANEGMNIDFDSFISCLVRLEAMFRAFQAFDQDGTIRLSVLEWLQLTMYA
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgccctatacaccgtccggcttcttctgtgaccggctgatccgggagagagagagaaga
gatggagaaggatccctcagcaagcccctgcgcttcagcggacaggacttcaccacactg
aaacaagagtgcctcaccaagaagtgcctgtttgaggatgacaccttcccagcctccgtg
gagtctctggggtacaaggagctgggacacaagtccaacaaggtcaagaacatcgtctgg
aggagacccaaggagatctgtgagaaccctcagttcattgtgggcggagccagcaggaca
gacatttgccagggagaccttggtgactgctggctgctggctgctatagcctgtctgact
ctgaatgagaagcttctctaccgggtcgttcctcaggatcagagctactccgagggctat
ggaggaatcttccacttccagttctggcgctatggcgactgggttgacgttgtcattgac
gaccgcatccccaccttcaacaaccagctggtgttcaccaagtctgctgaaaggaacgag
ttctggagcgccctgctggagaaggcctacgccaagcttcacggttcctacgaggccctg
aagggcggtaacactacggaggccatggaagacttcaccgggggcgtgacagagttctat
gagatgaaggaggcgcccaaggagctgtacaagatcatgaagaaggccctggagagaggc
tctatgatgggctgctctatcgactccctggttcctgctcgatttgagacgcgcactgtg
actggccttgtgaagggccacgcctactctgtgactgccgttgaggagtcccagcacaaa
gcgtctaaggtgcgtctggtgcgactcaggaacccctggggtcaggtggagtggaatggg
ccctggagtgacaactctaaggagtgggtgtctctgtctaagggagagaaggaccagctc
cagcatcagagtgctgaggacggggagttctggatgtcctttgaggacttcaagaagaac
tacactaagattgagatctgcaacctgacccctgatgccctggaggatgataagatccac
aagtggacggtgtctgtgaacgagggtcgttgggtcagaggctgctctgccgggggctgc
aggaactacccagatacattctggaccaaccctcagttccgcctgtgtctcttggaggag
gatgatgactcagaggacaacgaggtggcgtgttccttcgtggtctctctgatgcagaag
aacagacggaaagagaggaagttgggagccaatctcttcaccatcggatttgccatctac
gaggtgccgaaggagatgcacggaaacaagcagcacatgcagaaggacttcttcctgttc
aactcatccaaggctcgctgcaagtcctacatcaacctgagggaggtgacccagcgcttc
cgtctgagccccggggagtacgtgatcatcccgtctacctacgagcctcaccaggaggga
gagttcatcctcagagtcttctccgaaaagaggaacacctcagaggagatagagaacagg
atcgaggctgaccatacagtgccggccccagccaatgcgggggaggagagtgaggaggac
cagcagttccggagcctctttcagcagatagccgcggatgtgagtacggaaatggaagtt
accgccaacgagctgaagaatgtcctcaacagggttgtctccaaacataaggacctgaac
acagagggttttagcctggagtgctgcaggagcatgattgcactcgtggacatggacggg
acgggcagactcagcctgcaggagttcagacatctctggaacaagatcaagcagtggcag
gggatctttagacactacagctcggaccaggctggtatcatcaacagctacgagatgaga
aatgctatcaacgatgcaggcttccgtctcaacaaccagctgtatgacatcatcaccatg
cgttacgccaatgagggtatgaacatcgactttgacagcttcatcagctgtctggtccgg
ctagaagccatgttcagggcgttccaggcttttgatcaggatggtacgatcagacttagt
gtcttggagtggctccagctgaccatgtatgcctag
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