Oncorhynchus tshawytscha (Chinook salmon): 112255840
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Entry
112255840 CDS
T05605
Name
(RefSeq) DDB1- and CUL4-associated factor 5-like isoform X1
KO
K11800
DDB1- and CUL4-associated factor 5
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
otw04121
]
112255840
Ubiquitin system [BR:
otw04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
112255840
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_EIPR1
Beta-prop_EML_2
EIF3I
Beta-prop_EML
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
Beta-prop_HPS5
Beta-prop_WDR75_1st
Beta-prop_SPT8
WD40_MABP1-WDR62_2nd
WD40_RFWD3
WD40_CFAP43
Motif
Other DBs
NCBI-GeneID:
112255840
NCBI-ProteinID:
XP_042181065
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All DBs
Position
LG08:complement(6437893..6464587)
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AA seq
797 aa
AA seq
DB search
MKEVKGCGMRSSVGFLSQRRLFGNPLMKEEFQRLRLAGCTSLYKKDMLGHFGCVNAIEFS
NNGGEYLVSGGDDRRVLLWDMERVLHARSAKPLILKGEHLSNIFCLAFDSTNKRVFSGGN
DEQVILHDVEQGETLNVFLHDDAVYGLSVSPVNDNVFASSSDDGRVLIWDTRQPPHGEPF
CLANYPSAFHSVMFNPAEPRLLATANSKEGVGLWDIRKPRTSLLRYGGSMSLQSAMSVRF
NSAGTQLLALRRRLPPVLYELHSRLPSFQFDNQGYFNSCTMKSCCFAGDKDQYVLSGSDD
FNLYMWRIPKDPEAGGPGRVVNGASMVLKGHRSIVNQVRFNPSTNMICSSGVEKVIKAWS
PYQQTESLGDLDGCVENKSRSLYSHEEYISLVLNSGSGLRHDYVSQSIQEDPRMMAFFDS
LVRREIEGWSSDSDSDLSEGAILQLHARGRHSTRAVGDGAGVLVGAASPVHPAAAMGDSD
RSSSSSLAAPEALGVEPLMPRSRQRHHQSAFLLDLVGEDSDSSGFWLDPMPRPSPRDNST
LSSPTSSPAGASSSSSTTSSTSSEDEERRRVSTRQRNAARRRRMHFPCRPSGGRPESAQA
LYPGGVDSCSYPKISMDEASSSSASSTELQQGRDSVQIGPHRRSSKTGRCASNSGRLTGT
SPAVSLDSQDDLLITSQDTLQQRTESREGGVTGAALERMDNSSWVSSSSRHHHSPHQTEM
TEVPVDRLAPDLFASPDSRGEREALAGKQTDTMNQEEEEAGLSSQRGQAPTQGALKRTHL
GSGGQGSGEGLEKKLKR
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaggtgaagggttgcggtatgcggtcctctgtgggctttctgtctcagagaagg
cttttcgggaacccgctgatgaaggaagaatttcagagactccggttggcaggatgcacg
agcctttacaagaaagatatgctgggacatttcgggtgtgtaaacgccatagagttttcc
aacaatggaggggaataccttgtgtccggaggggatgaccgcagagtgctgctgtgggat
atggagagagtcctccatgctcgctcagccaagcctctcatactgaagggagaacacctc
tccaacatcttctgcctggctttcgacagcaccaacaagagggtgttctctgggggtaac
gacgaacaggtcatccttcatgatgtagagcaaggcgagactctgaacgtgttccttcac
gacgatgcggtgtacggcctgtcagtcagccccgttaacgacaacgtgttcgccagctcc
tcggacgacggacgggtcctcatctgggacacacggcaaccgccacacggagagcccttc
tgtctggccaactacccgtcagccttccacagtgtgatgttcaacccggcagagccccga
ctgctggctacagccaactccaaggagggggtggggctgtgggacatccgcaagcctcgc
acttctctgctgcggtacggcggtagcatgtccctccagagtgccatgtcggtgcgtttt
aacagcgcagggacccagctcctggccctgcgtcgcaggctacccccggtcctctacgag
ctacactctcgcctacccagcttccagtttgacaaccagggctacttcaactcctgtacc
atgaagagctgctgctttgctggagacaaggatcagtacgtcttgtctggatcagatgac
ttcaacctttatatgtggagaatcccaaaggatcctgaagcaggaggcccggggcgtgtg
gtcaacggagcgtccatggtcctgaaaggtcaccgttccatcgtgaaccaagtccggttc
aaccccagcaccaatatgatctgctcctccggggtcgagaaggtcatcaaggcgtggagc
ccctaccagcagacagagagtctgggcgacctggatggttgtgtggagaataagtccagg
agtctgtacagccatgaggagtatatcagcctggtgctgaacagcggcagcggcctgagg
cacgactacgtctcacagtccatccaggaggatcctcgtatgatggccttctttgactct
ctggttcgtcgggagatcgagggctggagttcggactcagacagtgacctgagtgagggg
gccatcctgcagctccatgccaggggacgacactccacgcgggctgtaggagatggcgcc
ggggtcctggttggtgctgcttcacctgtacatcccgctgctgctatgggcgactcggac
cgctcctcctcatcctcattggctgcacccgaggccttgggggtggagccgctgatgccc
aggagtcgtcagcgacatcaccagtctgcgttcttattggacctggtgggagaggactct
gattcctctgggttctggctggaccccatgccacgccccagcccccgagacaactccacc
ctctccagccccacatcctcccccgctggggcctcctccagctcctccaccacctcctcc
accagctctgaggatgaggagcgccgcagggtcagcacccggcaacgcaacgccgcacgg
aggcgccgcatgcacttcccctgcaggcccagtggagggcgccccgagtccgcccaggcc
ctgtaccccgggggggtcgactcctgctcctaccccaagatctccatggatgaggcctca
tcctcctccgcatcctccacggagctgcagcagggccgggactcggtccagatcggaccc
cacagaaggagctcgaaaacgggaagatgtgccagcaattcgggcagacttaccggtacc
agccctgcagtctctctggacagccaagacgaccttctcatcacctctcaggacaccctg
cagcagaggaccgagtcccgggagggaggggtgacgggggctgctttagagaggatggac
aacagtagctgggtctcctcttcctccagacatcaccacagcccccaccagactgagatg
actgaagtgccagtagaccgtctggctccagacctgtttgcgtccccagattccaggggg
gagagggaggccttggcggggaaacaaacagacactatgaaccaggaagaggaagaggca
gggctgtcttctcagagaggccaggcccctacccagggggcgctaaaacggactcacctg
gggtcagggggtcaagggtcaggggaggggttagagaagaagttgaagagatga
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