KEGG   Oncorhynchus tshawytscha (Chinook salmon): 112255846
Entry
112255846         CDS       T05605                                 
Name
(RefSeq) M1-specific T cell receptor beta chain-like
  KO
K10785  T-cell receptor beta chain V region
Organism
otw  Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04020  Calcium signaling pathway
otw04514  Cell adhesion molecules
otw04672  Intestinal immune network for IgA production
Brite
KEGG Orthology (KO) [BR:otw00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04020 Calcium signaling pathway
    112255846
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    112255846
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    112255846
SSDB
Motif
Pfam: C1-set V-set Ig_3 Ig_2
Other DBs
NCBI-GeneID: 112255846
NCBI-ProteinID: XP_042181049
LinkDB
Position
LG08:5466680..5499879
AA seq 314 aa
MSFTEMMSDMTHPIVLLSWLFLLSPSQCGAAGPIVLQPRQLLTLPGNTTTSSPVTLQCSL
GPGFSMPSYTMMWYRQVRYGGPVEFLIKEYEKTRGRYKEDLDTSGNRFILQISELVVEDS
GVYYCAASSGGYAAYFGEGTKLTVLDPNIKVTEPTVKVLAPSAKECEDINKKKKKTLVCV
ATRFYPDHVTVFWQVNNVNRTEGAGTDNRALWDKDGLYSITSRLRVPANEWHKPENRFTC
NVSFYNGTDNIQVNDTIRGDLQGQSGGEITTDYYVKSTQTAKLAYSIFIAKSTFYGLVVM
VMIWKFQGSSEKQI
NT seq 945 nt   +upstreamnt  +downstreamnt
atgtcattcacagagatgatgagtgacatgacgcatcctatagtcctcctgagttggctg
tttctcctgtccccaagtcagtgtggagcagcaggccccatagtgcttcagcccagacag
ctcctcacccttcctggtaacaccaccacctccagtccagtcaccctgcagtgctccctg
ggtccaggcttcagcatgcccagctacaccatgatgtggtaccgacaggtccgctatgga
ggcccagtggagttcctcattaaggagtacgagaaaacccgggggcgatacaaagaggac
ctggacacatcggggaacaggttcatcctgcagatttctgagctggttgtggaggacagt
ggtgtctactactgcgctgctagctctggtggttatgctgcctactttggagagggaact
aagctaacagttctggatccaaacatcaaagtcactgaacccacagtgaaagtcctagca
ccctccgctaaggagtgtgaagatataaacaagaagaagaagaagaccctagtgtgtgta
gccacccgcttctaccccgaccacgtcacggtcttctggcaagtcaacaatgtcaacaga
actgaaggtgccgggaccgacaacagggccttgtgggataaagatggtttatacagtatc
accagcagactgagagtcccagccaatgaatggcacaaaccagagaacagattcacctgc
aatgtcagcttttacaatgggactgacaatatacaagtgaatgacaccattcgtggagat
ctccaaggtcaaagtgggggagagataacgacagattactatgtgaagagcacccagact
gccaagctggcctacagcatcttcatcgctaagagtaccttctatggcctggtcgtcatg
gttatgatttggaagttccagggctcctcagagaaacagatttaa

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