Oncorhynchus tshawytscha (Chinook salmon): 112255846
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Entry
112255846 CDS
T05605
Name
(RefSeq) M1-specific T cell receptor beta chain-like
KO
K10785
T-cell receptor beta chain V region
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04020
Calcium signaling pathway
otw04514
Cell adhesion molecule (CAM) interaction
otw04672
Intestinal immune network for IgA production
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
112255846
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
112255846
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
112255846
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Motif
Pfam:
C1-set
V-set
Ig_3
Ig_2
I-set
Motif
Other DBs
NCBI-GeneID:
112255846
NCBI-ProteinID:
XP_042181049
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All DBs
Position
LG08:5466680..5499879
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AA seq
314 aa
AA seq
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MSFTEMMSDMTHPIVLLSWLFLLSPSQCGAAGPIVLQPRQLLTLPGNTTTSSPVTLQCSL
GPGFSMPSYTMMWYRQVRYGGPVEFLIKEYEKTRGRYKEDLDTSGNRFILQISELVVEDS
GVYYCAASSGGYAAYFGEGTKLTVLDPNIKVTEPTVKVLAPSAKECEDINKKKKKTLVCV
ATRFYPDHVTVFWQVNNVNRTEGAGTDNRALWDKDGLYSITSRLRVPANEWHKPENRFTC
NVSFYNGTDNIQVNDTIRGDLQGQSGGEITTDYYVKSTQTAKLAYSIFIAKSTFYGLVVM
VMIWKFQGSSEKQI
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgtcattcacagagatgatgagtgacatgacgcatcctatagtcctcctgagttggctg
tttctcctgtccccaagtcagtgtggagcagcaggccccatagtgcttcagcccagacag
ctcctcacccttcctggtaacaccaccacctccagtccagtcaccctgcagtgctccctg
ggtccaggcttcagcatgcccagctacaccatgatgtggtaccgacaggtccgctatgga
ggcccagtggagttcctcattaaggagtacgagaaaacccgggggcgatacaaagaggac
ctggacacatcggggaacaggttcatcctgcagatttctgagctggttgtggaggacagt
ggtgtctactactgcgctgctagctctggtggttatgctgcctactttggagagggaact
aagctaacagttctggatccaaacatcaaagtcactgaacccacagtgaaagtcctagca
ccctccgctaaggagtgtgaagatataaacaagaagaagaagaagaccctagtgtgtgta
gccacccgcttctaccccgaccacgtcacggtcttctggcaagtcaacaatgtcaacaga
actgaaggtgccgggaccgacaacagggccttgtgggataaagatggtttatacagtatc
accagcagactgagagtcccagccaatgaatggcacaaaccagagaacagattcacctgc
aatgtcagcttttacaatgggactgacaatatacaagtgaatgacaccattcgtggagat
ctccaaggtcaaagtgggggagagataacgacagattactatgtgaagagcacccagact
gccaagctggcctacagcatcttcatcgctaagagtaccttctatggcctggtcgtcatg
gttatgatttggaagttccagggctcctcagagaaacagatttaa
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