Oncorhynchus tshawytscha (Chinook salmon): 112255862
Help
Entry
112255862 CDS
T05605
Name
(RefSeq) arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 3
KO
K12490
Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 3
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
112255862
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112255862
Membrane trafficking [BR:
otw04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
112255862
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
112255862
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH
RhoGAP
ArfGap
RA
SAM_1
SAM_2
PH_11
PH_6
PH_3
PH_8
BLM10_mid
Motif
Other DBs
NCBI-GeneID:
112255862
NCBI-ProteinID:
XP_042182266
LinkDB
All DBs
Position
LG08:complement(82872746..82940081)
Genome browser
AA seq
1735 aa
AA seq
DB search
MYVVMATIDGNTDVETLLAAIHLERYLKTFRQSGFLLARDLSHLDNGALIQLGVTATGHR
KRILRLVQHIQRATNQNQLTSEPLEPLLDRCQSESDINSTPIQSGGPRSDQGGGTGAIPF
EAFRNNSVPNIPSMLMNSGSEQQQQYNGNVVIKPVPKPRTVFYRHKTEPARFLSCPIPPT
SPDPHVLTLTRKPSQESLCFTILEGLASGEFNTDTVMVGPTPNPAPTPTLRHSLSLRERR
LSNSSDSGGPQPPVPPRLNRGTPPAMFSGPTSTPPSSGGRTEQNQDQCMTTPPPSSSYDN
TGFPSLATSPPGSPMEMVSNEIYCGTKPGTAASSGRIPCNAPQTPPRPEIHTSPEGNGTL
NNNSRESSQGVPMEDPEEEISPYCETVFQTRRPLQHSEAERTRCEGKTGMTRAVEEKHGE
DHGTPKLSWAKRLSHALHSESQGYSTVGEAAPPPLCLSLPPNLYPSEPDEDQTISPYASY
TSLSEQTEPIICGWLDKLSPQGNYVFQKRYVKFDGKNLLYFGSEKDPYPKGVIPLAAIQM
ARMAKDNKFEIVTSHRTFVFRADNEVQRHQWCSTLQGRVKEQLVFGRPRFGPGSHCQRSG
PLELKGTKSKVYVAINTEQVWLYKTEQCFRNGIGITLIEARGATIRDAKGKSFDLITPYK
TFSFTAESERDKRDWMEAVQESIAETLSDYEVAEKIWSNRFNKLCADCQAVNPDWASINL
CVVICKNCAGQHRGLGTMVSKVQSLKLDTSVWSNEIVQLFIMLGNDRANEFWAARLSPAD
ELCHDATPDQRREFIIHKYREGRYRHPHPNFNTQEELLKVLCTAVTEQNLLKTVTQIFTE
AEAVRARLAASNGYDKHVSQEYSLPQGTSDPGVYDEIMQAVLHSGYLYKSASMNKGTLSR
KTREDFQKYWCTVERSLLFYESDRCPDPSMKINVKDIVCLGVSRPDSCNNNGFIDRFLYT
FQLYLSSEKLYQFGLETPDALQCWVKAIGKAATPLSCHCLLAREFERVGVLRYKAMRDPS
QWKEGYFVLQKSNLFICPGNDGAAEDIINLKRLQELSIVTENQNHEKKEILVLVEKGRTL
HLQGMGRLDFSLWYADIQRAAGGKGNTLREQQLSRNDIPIIVDSCIAFITQYGLGHEGIY
RKNGAASRIKLLMEEFRNDARNVRLRIGDNFIEDVTDVLKRFFREIDDPIFMADLHQLWK
EAVRTAKDKNQRLDRYKEIIRSLPRVNRTTLAALISHLYRVQKCSLSLSLLGSDNYLYVF
DVREHEVKIVEDLIDNYLYIFDIDEEQQTQIELELSLITTWKDTQLSQAGDLIIEVYLEK
KMADCCITLKVSPTMGAEELTNQVLYMRNIPAGEKDVWLTFETIEEGQLERPLHPKEKVL
EQALQWCKMADPSSAYLVVKRVPKGEGINILTAYKSEIMKMGVLKCREEPPKLLHGKVFQ
EHTFQIKDHKLLLLKDKKSIKPEKEWPLKSMKIYMGIRKKLKPPTRWGFTLMMEKQQLYL
CCFCESDLWDWVTNFLKAQNDDPRPPVLRRHSSSDISKQKFGTMPLVPIRGDGHESNSTM
LSANQTLRKLHARRTLSMFFPMKVQQDSFEEHPEPEPPEPLYEEVGDFGLQVLKSLETSF
LSNNTSETQEVPDGPLSLILGPRKTGSLDRMIGPNPVHSLGLGGEGLLPPAGSLDTLVLG
ERENLQESNQPVPRRRRQQHRPCTPSQELLLQELSSVFTKKTENEEKPPGEKNVI
NT seq
5208 nt
NT seq
+upstream
nt +downstream
nt
atgtacgttgttatggcaacaatagatggaaacacggacgttgagaccctgttggctgcg
atccacctggagcgatacctgaagaccttccgccagtctggcttcctcttggccagggac
ctcagccacctagacaatggagctcttatccagctgggtgtaactgccaccggacacagg
aagagaatactgaggcttgtccagcacattcagagggctaccaatcagaatcagttgaca
tcagagcccttggagcccttattggaccgttgtcagtctgagtctgacattaattccaca
cccatccaatcaggagggccgaggtctgaccaagggggcggaactggggccattccgttt
gaagcgttccggaataattctgttcctaacattccatccatgttgatgaactccgggtca
gaacagcagcaacagtacaatgggaatgttgtcataaaaccggttccaaaacctagaaca
gtgttttacagacacaaaacagaacccgcccggtttctctcctgtcctataccaccgaca
tcaccagatcctcatgttctgaccctaaccaggaaaccgtctcaggaatctctctgtttc
accatattggaaggtttggcttcaggtgaatttaacactgacacagtgatggtggggcct
acccctaaccctgcccctacccctaccctgagacacagcctaagcctgagagagaggagg
ctgagtaactcttcagactctggaggtccccagccccctgttccccctcggctgaaccga
ggtacccctccagccatgtttagtggacctacatccacaccaccgtcatctggtggaagg
actgaacaaaaccaggaccagtgcatgacaaccccacctccctcatcctcctatgataac
actggattcccctctctggctacttcccctcctggctccccgatggagatggtctccaat
gagatctactgtggcactaaacctggcacggcagctagtagtggacggattccctgcaac
gctcctcaaacaccaccacggccagagatccacacctctcctgaaggaaatggcacttta
aataacaactctcgtgaatcgtcccaaggagtccccatggaggacccagaggaggagatc
agtccctactgtgaaacagtcttccagaccagacgaccactgcagcactctgaggcggaa
aggaccagatgtgaaggaaagacaggaatgacaagagcggtggaagagaaacacggagag
gatcatgggacacccaaactctcctgggccaaacgtctgtcccacgccctccacagtgag
tcccagggctacagcacagtaggagaggcagcaccaccccctctctgcctctccttaccc
cccaacctgtacccctcggagccagatgaggaccagacgatatccccctacgccagctac
acctctctctctgagcagactgaacccatcatctgtggctggctggacaagctatcacca
caagggaactatgtattccagaaacgctatgtgaagtttgatggcaaaaatctgctgtac
ttcggcagtgaaaaggacccgtaccccaaaggagtgatccctctggctgcgatacagatg
gcccgcatggccaaagacaataaatttgagatagtgacaagtcacaggacgtttgtcttc
cgggctgataacgaagtgcagagacatcagtggtgcagtaccctacaggggagggtgaag
gaacagcttgtgttcgggcgccctcgcttcggtcctggcagccactgtcagaggagtggt
cctctggagctcaaagggaccaagtcaaaagtctacgtggccatcaacacagagcaggtc
tggctgtacaagactgagcagtgttttaggaatgggattggaatcacgctgatcgaggcc
agaggagctacgatcagagacgccaaaggaaagagctttgacctcatcacaccttacaaa
acattcagtttcacagctgagtctgagcgggataagagggactggatggaggctgtacag
gagtccatagcagagaccctgtctgactacgaggtggctgagaagatctggtccaacagg
ttcaataagctctgtgctgactgccaagcagtcaaccctgactgggcctccattaacctc
tgtgttgtcatctgtaagaactgtgcaggtcaacacagaggtctggggactatggtgtct
aaagtacagagcctgaaactggacaccagcgtgtggagtaatgagatcgtgcagctcttc
ataatgttggggaacgaccgagccaatgagttctgggcggccaggttatctccagctgac
gagttatgccatgacgccacaccggaccagcggagagagtttatcatccataagtaccgt
gaggggcgctaccgacacccccaccccaacttcaacacacaggaggagctgctcaaggtt
ctgtgtactgctgtgaccgagcagaacctgctgaagacagtcacccagatatttaccgag
gcagaggctgtccgagcccgcctcgctgcctctaatggatatgacaagcatgtgtctcag
gaatactccctcccgcaaggcacctcagaccccggtgtgtatgatgagattatgcaggcc
gtgctgcactccggctacctctacaagtcagcctcaatgaacaaagggacattatccagg
aaaaccagagaagatttccagaagtactggtgcacggtagagaggtctcttctgttctac
gagtctgaccgatgtcctgatccaagcatgaagatcaacgtcaaagacatcgtctgtctg
ggggtcagcaggccggactcctgcaacaacaacggcttcattgacaggtttctctatacg
tttcaactgtacctgtcctcagagaagctctatcagtttggattggaaactcctgatgcg
ctgcaatgttgggtcaaggccatcggaaaggccgccacacctttaagctgccactgcctg
ctagcgagggagtttgagcgggtgggagtgctgcgttacaaggccatgcgagacccttct
cagtggaaagagggatattttgtccttcagaagtctaacctcttcatctgcccagggaac
gacggagcagctgaggacattatcaaccttaaacgtctgcaagagctcagtatagtaact
gagaaccaaaaccatgagaagaaggaaattctggttttggttgaaaaaggaaggacgcta
cacctccaggggatgggtcggttagacttctccctgtggtacgcagacatccagagagct
gctggagggaagggcaacaccctgagagaacagcagctcagcaggaatgatatccccatc
atcgtagacagctgcatcgccttcatcacacagtatggtctgggtcacgaggggatctac
aggaagaacggagccgcgtccaggatcaaactactgatggaggagttcaggaacgatgct
cgtaacgtcaggctccggatcggggataacttcatagaggatgtgactgacgtgctgaag
aggttcttcagggagatagacgaccccatcttcatggctgacctgcatcagctatggaaa
gaggctgtcagaacagccaaggataagaaccagcgtctggacagatacaaggagatcatc
cgtagtttacctagagtcaacaggactaccctggctgctctcatcagccatctctacagg
gttcagaagtgttctctctctctctctctcttgggttcagacaactacctgtatgtcttt
gatgtgagagaacacgaagtgaagatcgttgaagacctcatagacaactacctgtatatc
tttgatattgatgaggagcaacagacccagatagaactggagctcagcctcatcaccacc
tggaaggacacacagctgtcccaagcaggtgacctgatcattgaagtgtacctggagaag
aagatggcagactgctgcatcacactcaaggtatctccaaccatgggtgctgaggagttg
actaaccaggtcctgtacatgaggaacatcccagcaggggagaaggacgtgtggctgacg
ttcgagaccatagaggaaggacaactggagcggcccctacaccccaaagagaaggtgctg
gagcaggctctacagtggtgtaaaatggctgatcctagttcagcttacctggtggtgaag
agagttcccaaaggagagggcatcaacatcctcactgcctacaagagtgagataatgaag
atgggagttctgaagtgtcgtgaagagcctcccaaactcctccacggaaaagtctttcag
gaacacacctttcagatcaaagaccacaagctgctactgctgaaggacaaaaagagcatc
aagccggaaaaggaatggcctctgaaatctatgaagatctacatgggaattcgaaagaag
ctgaaaccccccactagatggggctttactctcatgatggaaaaacagcaactgtacctt
tgttgcttttgtgagtctgacctatgggattgggtcaccaatttcctcaaagcacagaat
gatgacccccgacctccggtgttgaggcgtcactcctcctcagacatctccaaacagaag
tttgggaccatgcccctagtaccaatcagaggggacggacatgagagcaactctaccatg
ctgtcagccaatcagactctgcgaaagcttcacgctagaaggactctctccatgttcttt
cccatgaaggtgcagcaggactccttcgaggagcatccagaaccagaacccccagagcct
ctgtatgaggaagtaggagacttcggcctgcaggtcctcaagtccctggagaccagcttc
ctctccaacaacacctcagagacccaggaggtccctgacgggcccctgagcctcatcctg
ggccctcggaagacgggctccctggaccgcatgatcggccccaacccggttcactctctg
ggactgggaggagagggtctgctgccccctgctggttctctggataccctggtcctgggt
gaaagagagaacctccaggagtctaatcagccagtgccgaggaggaggaggcagcagcac
aggccctgtaccccctctcaggagctgctcctccaggaactatcctcagtcttcaccaag
aagacagagaatgaggagaaaccaccaggagagaagaacgtcatctga
DBGET
integrated database retrieval system
