Oncorhynchus tshawytscha (Chinook salmon): 112255875
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Entry
112255875 CDS
T05605
Name
(RefSeq) vesicular integral-membrane protein VIP36 isoform X1
KO
K10082
lectin, mannose-binding 2
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
112255875
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112255875
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
otw04091
]
112255875
Membrane trafficking [BR:
otw04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
ER-Golgi intermediate compartment (ERGIC) proteins
112255875
Lectins [BR:
otw04091
]
L-type lectins
112255875
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Lectin_leg-like
Bact_lectin
Motif
Other DBs
NCBI-GeneID:
112255875
NCBI-ProteinID:
XP_024284481
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Position
LG08:81709174..81728070
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AA seq
347 aa
AA seq
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MVSFIGRVSKMRGFCTFISRPLLFLLLHFTLVQCDITDGNAEHLKREHSLMKPYQGVGSS
PSSQWDFWGSTLVTSSYVRLTPDERSRQGSIWNTVPVYLKDWEMHVQYKIHGSGKKNLHG
DGIAIWYTKERLHPGPVFGNQDHFVGLALFVDTFRNDLHGMDRSFPYIYAIVNNGSLPYD
HGNDGRNSELGGCSSEIRNKDHDTYLAIRYSKGRLTVMIDIDDKNEWKECIDIGGVRLPT
GYYFGASAATGDLSDNHDIISMKMYQLMVEHTPDEDSLDWTKIEPSVSLLKSPKDNIDDP
TGNFRSTPLTGWKVFLLLLCALLGIVVCGVVGAVVFQKRQERNRRFY
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atggtgtctttcataggccgagtgagcaaaatgagaggtttttgtacatttatcagcagg
ccactgcttttcctattacttcactttactctagtgcaatgcgatataacagacggcaat
gcagagcacttaaagcgggagcattcgctcatgaaaccgtaccagggtgttggaagcagc
ccatccagtcagtgggacttctgggggagcacgctagtcaccagctcctatgtgcgcctg
acacctgatgagagaagtagacagggatccatatggaacacagtgcctgtttatctgaaa
gactgggagatgcacgtgcagtacaagatccacgggtcggggaagaagaatctccatggt
gacggcatcgccatctggtacacgaaggagagacttcatccaggcccagtctttggaaac
caagatcattttgttggcctggctttatttgtggataccttccgcaatgatctccatggg
atggatcgttccttcccttacatctatgccattgtgaataatggttctctgccctatgac
catgggaatgatggacgtaactctgaactgggaggctgctcttctgagatcaggaacaaa
gaccatgacacctatctggccatccgttactccaagggtagactcacggtgatgattgac
attgatgataagaatgaatggaaagagtgcattgacatcgggggtgtccgcctccccacg
gggtactactttggggcttctgctgctacgggagatctctctgataaccacgacatcatc
tctatgaagatgtaccagctgatggtagaacacacacctgatgaggacagtctggactgg
accaagattgagccaagcgtcagcctgctgaaatcccccaaagacaacattgatgatcct
actggtaacttccgaagcacgcctcttactggctggaaggtcttcctgcttctgctatgt
gctctactgggaattgtagtttgtggtgttgtaggggctgttgtatttcagaagcgccag
gaaagaaacaggagattttactga
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integrated database retrieval system
