Oncorhynchus tshawytscha (Chinook salmon): 112255884
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Entry
112255884 CDS
T05605
Name
(RefSeq) LOW QUALITY PROTEIN: TBC1 domain family member 2B-like
KO
K20166
TBC1 domain family member 2B
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112255884
Membrane trafficking [BR:
otw04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
112255884
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
TMF_TATA_bd
PI3K_P85_iSH2
DUF16
V_ATPase_I
FlaC_arch
Motif
Other DBs
NCBI-GeneID:
112255884
NCBI-ProteinID:
XP_042178340
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All DBs
Position
LG01:583071..623804
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AA seq
728 aa
AA seq
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MLDAPSTKDINQDHKPPTQPQTDSHRHSIGSPFTFDFGRSSSSSLRPKRPTLRDIMGSGR
LGRSTESSSPSSQTTPPVECNGSRTNELQLRLQSQEQELTRLHEENNNLTEELTSQKELV
RLLQQTLRSTQRRCDQRHYTPVPASPPAPGFPQSDLAQMEALLLDRDGQVQALCCQIERL
ALEKESLQRELKGLKVKVGEINEQLSMLMETIQAKDEVIIKLSQTPPQGADGTTPLLQDC
SSAPPPASQQQEINNLKDSVQGYKSQNKFLNKEILELTILLRNAEARERSLEVKYVALEA
KVCQVESKYLVLLQDLKNPVCSSSEESCQEVISRLLEDALNNTDPTGHAVFKPHPVSEYD
VFGFKTVPEEDDEEEKLVAKVRALDLCSLSLTDPEVSVGVKWENYLSSTMNRDMVHCPEL
KALMRSGVPHVHRSKVWRWCVSYHTRKFRDSLAPNYYETLLGVARDKPNPASKQIELDLL
RTLPNNKHYSSPGADGIQKLRNVLLAFSWRNPDIGYCQGLNRLAAIALLYLDQEDAFWCL
ITIVEVFMPQDYYTKTLLGSQDHRVFKDLLHYWKLPRLHAHFDLYKVDSSLITFNWFLVL
FVDSVNSDLLFKIWDAFLYEGPKIIFRFALALFKYKEEEFLKLQDSMAIFKYLRYFTITI
LDWRKLMSIAFVDMNPFPLRQILNMXTFHLEKVRLELTELEAIRQTFLRERDTHTDAGAL
CSDDEEDN
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgttagacgctccctcaaccaaggacatcaaccaggaccacaaacctcccacccagcct
cagactgactcacacagacactccattggttctccattcacatttgacttcgggcggagc
agcagttcctcgttgcggcccaagcggcccactctgcgggacataatgggttcagggagg
ttaggacgcagcacagagagctcttccccctcttctcagaccacacccccagtggagtgt
aacggcagcaggaccaatgagctgcagctccgcctccagagccaggaacaggaactgaca
cgcctccacgaggagaacaacaacctgactgaggagttaacctcccagaaggagctggtc
agactgcttcagcagaccttgaggagcacccagaggagatgcgaccagcgccactatact
ccagtacctgcctcacctccagccccagggttcccacagtcggacctagcccagatggaa
gccctcctcctagacagggatggtcaggtccaggccctgtgctgccagatagagcgtcta
gccctggagaaggagagtctacagagggagctgaaaggactgaaggtcaaggttggggag
atcaatgagcagctgagcatgctgatggagaccatccaggccaaagacgaggtcatcatt
aaactgtcccagacacccccccagggagcagacgggaccacccccctgctgcaggactgc
agctcagctccaccccccgccagccagcaacaggagataaacaaccttaaggacagtgtt
caaggctataaatcccagaacaagttcctgaataaggagatcctggagctgactattcta
ctaaggaacgctgaggccagggagagatctctggaggttaagtatgtggcgttggaggct
aaagtgtgtcaggttgagagtaagtacctggtgctgcttcaggacctgaagaacccagtg
tgttcctcttcagaagagtcctgccaggaggtcatctctagactgttggaggatgcactg
aacaacactgaccctacgggacacgccgtctttaagccacaccctgtcagtgagtacgat
gtgtttggcttcaaaacagttccagaggaggatgatgaagaggagaagctggtagccaag
gtgagggctctggacctgtgctccctctccctaacagaccctgaggtgtcagtgggggtg
aagtgggagaactatctctcctctactatgaacagagacatggtgcactgccccgaactc
aaagcccttatgaggagcggggtgccacatgtccaccgctccaaggtgtggcgctggtgc
gtgtcctaccacaccaggaagttccgtgacagcctggctccaaactactacgagacctta
ctgggtgtggccagagacaagcctaatcccgcctccaaacagatagagcttgacctgctg
aggaccttacctaacaacaaacactactcctcccccggcgccgacggaatacagaaacta
cgtaatgtcctgctagccttctcctggaggaaccctgacataggatactgccagggactc
aacaggctggcagccatagctctgctgtacctggaccaggaggatgctttctggtgtctc
atcactatcgtggaggtcttcatgccccaggactactacaccaagaccctgctgggatca
caggaccaccgagtgttcaaggacctgctgcattattggaagctgcccagactccacgcc
cactttgacctctacaaggttgactcctccctcattaccttcaactggttcctggtcctc
ttcgtagactcagtgaactctgacctcctcttcaagatctgggatgccttcctgtacgag
ggacccaagatcatcttccgcttcgccctcgctctcttcaagtacaaggaggaagagttt
ctgaagcttcaggactccatggccatcttcaagtacctccgctatttcaccataactatc
ctggactggaggaagttgatgagcatagcgtttgtggacatgaatccgttccccctgaga
cagatccttaacatgnngaccttccatctggagaaggttagactagagctgacagagcta
gaggccatcagacaaaccttcctcagagagagagacacacacaccgacgcaggcgcgctg
tgtagcgacgatgaggaggacaactag
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