Oncorhynchus tshawytscha (Chinook salmon): 112255986
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Entry
112255986 CDS
T05605
Symbol
pdlim3b
Name
(RefSeq) PDZ and LIM domain protein 3b isoform X1
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
112255986 (pdlim3b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
otw04990
]
112255986 (pdlim3b)
Domain-containing proteins not elsewhere classified [BR:
otw04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
112255986 (pdlim3b)
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Ortholog
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GFIT
Motif
Pfam:
DUF4749
PDZ
LIM
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
112255986
NCBI-ProteinID:
XP_042181835
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All DBs
Position
LG08:complement(72056389..72089736)
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AA seq
388 aa
AA seq
DB search
MPQNVVLDGPAPWGFRLNGGKDFNQPLTITRVTPGSKASLANLCPGDIILAIEGVSTECM
THSEAQNKIKDPASRLGLKIERPETKMWSPQVTEDGKANPFKLNLEAEQQELKPIGTGHN
RRAQPFMAAATIDNGRQVVSSSYNTPIGLYSSGNIQDALHGQLPGLVHDKHEGECPPPQG
LMGNGHQTVVTLSPPDPPLSANSGTDQPLAPSAQYNSPINLYSEANVSAAQQLAQVTSVE
EQVPLSSKTLSSIKESHVYRMLQDDQDRPHEPRQSGSFKALQEHVETDGAKPLITRSVRA
PVTKPPTPAGSLQKLPLCDKCGNGIVGTVVKAREKFRHPGCFVCSDCKVNLKQRGYVFVE
GQLYCETHARARTIPPEGHDVITVYPTA
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgccccagaatgtggtcctggatgggccagccccctggggattcaggctcaatggaggg
aaggacttcaaccagcccctgaccatcaccagggtgacgcctggcagcaaagcctcgctg
gccaacctgtgccccggtgacatcatcctggccatagagggtgtgagtacagagtgcatg
actcacagcgaggcccagaacaagatcaaagaccctgcctcccggctcggcctcaagatt
gagaggcctgagaccaaaatgtggtcaccccaagtcacagaggatgggaaagcaaaccca
ttcaagctcaatttagaggcagaacaacaagagttgaaacctatcggtacaggtcacaac
cgacgcgcccagcccttcatggctgcggccaccatagacaacggacgccaggtggtgagt
tcctcctacaacacccccataggcctctactcctcaggcaacatccaggacgccctgcac
ggacagctcccaggccttgttcacgataagcatgagggcgagtgccctcctccgcaaggc
ctgatgggaaatggccatcagacagtggtcaccctctccccccctgaccctcccctgtct
gctaactccggcacagaccaacccctggcccccagtgctcagtataactcccccattaac
ctgtactctgaggccaacgtctcggccgctcagcagctagctcaggtcacctcagtagag
gaacaggtccctctaagtagtaagacactgtcctccatcaaggagtctcatgtgtaccgg
atgctccaggatgatcaggataggccacatgaaccacgtcagtcaggctcctttaaggct
ctgcaggaacacgtggagactgatggagcaaagccattgattactagaagtgtaagagct
ccagtgacaaagcctccaacacctgcgggatcgctacagaaactacccctctgtgacaag
tgtggaaacggcatagtaggcacagtggtgaaggccagagaaaagttccgccaccctgga
tgtttcgtgtgctccgactgcaaagtcaacctgaagcagaggggctacgtctttgtggag
gggcagctgtactgcgagacccatgcccgcgcccggacgatacctccagagggacacgat
gtcatcaccgtttaccccacggcttga
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