Oncorhynchus tshawytscha (Chinook salmon): 112255993
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Entry
112255993 CDS
T05605
Name
(RefSeq) long-chain-fatty-acid--CoA ligase 1
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw00061
Fatty acid biosynthesis
otw00071
Fatty acid degradation
otw01100
Metabolic pathways
otw01212
Fatty acid metabolism
otw03320
PPAR signaling pathway
otw04146
Peroxisome
otw04216
Ferroptosis
otw04920
Adipocytokine signaling pathway
Module
otw_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
112255993
00071 Fatty acid degradation
112255993
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
112255993
09143 Cell growth and death
04216 Ferroptosis
112255993
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
112255993
03320 PPAR signaling pathway
112255993
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
otw01004
]
112255993
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
otw04147
]
112255993
Enzymes [BR:
otw01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
112255993
Lipid biosynthesis proteins [BR:
otw01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
112255993
Exosome [BR:
otw04147
]
Exosomal proteins
Exosomal proteins of breast milk
112255993
Exosomal proteins of breast cancer cells
112255993
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
112255993
NCBI-ProteinID:
XP_024284664
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All DBs
Position
LG08:71935189..71960299
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AA seq
697 aa
AA seq
DB search
MQSQQLLNQLRFPELDEVRQYLRSLSTHTLVGVGAFAALTTYWYTTRPKALKPPCDLKMQ
SVEVPGGEYARRSALMDSDKHMTHLYNDAKTMYEFFLRGARVSNNGPCLGARQPSQSYEW
LSYSEVAEKAENLGSALLHRGHTKTKDQFIGIFAQNRPEWTIAELACYTFSLVAVPLYDT
LGTEAIAYVIDKANISSILCDVPEKARLVLECVSGREHRVRTIILMEPFDDELVAKGKDC
GIDILSLSQVEAIGKAHHHQPVPPSPEDMAVVCFTSGTTGNPKGAMLTHGNVASNCSAFI
KVIEDHLILDHHDVHISYLPLAHMFERVVEGVILVHGGRIGFFQGDIRLLMDDLTTLRPT
VFPVVPRLLNRMFDKIYGQANTSLKRWVLDFAFKRKEAELLSGIIRRDSIWDKLIFRKVQ
ASLGGRVRLMITGAAPVSATVLTFLRAALGCQLYEGYGQTECTAGCTMTVPGDWTAGHVG
APLPCNSVKLVDVAEMNYLAANGEGEVCVKGANVFLGYLKDPEKTEETIDANGWVHTGDI
GKWLPNGTLRIVDRKKHIFKLAQGEYIAPEKIENIYTRSDAVAQVFVHGDSLQACLVAII
VPDPDFLPGWAKKRGLEGSYGDLCNNMDVKKAILEDILKLGKDSGLKSFEQVKDITLFTE
MFSIQNGLLTPTLKAKRAELRNYFREQIDKLYSKIKM
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgcaatcccagcagctcctgaatcagctgcgcttccccgagctggacgaggtgcggcag
tacctgcgcagtctgtccacacacacgttggtgggtgtgggggcatttgctgctctcaca
acctactggtacaccacccggcccaaggccctgaagccaccgtgcgacctgaaaatgcag
tccgtcgaggtcccgggaggagagtatgcccgtcggtcagcgctgatggacagcgacaaa
cacatgacccacctgtacaacgacgccaagaccatgtatgagttcttcctcaggggcgca
cgggtctccaacaatggtccctgtcttggagcaagacaaccaagccagtcctatgagtgg
ctgtcatactccgaggtagcagagaaggcagagaacctgggctcagcgctgctccacagg
ggacacactaaaaccaaagaccagttcattggcatcttcgctcagaaccgaccagagtgg
accatcgctgagctggcctgctataccttctccctggtggctgtgcccctgtatgacact
ctgggcactgaggccatcgcctatgtcatcgacaaggccaacatttccagcatactgtgt
gacgttcctgagaaggccaggctagtcctggagtgcgtctctggcagggagcaccgtgtc
agaaccatcatcctcatggagccctttgatgatgagctggtggccaaggggaaggactgt
ggcatcgacattctcagcctgagccaagtggaggctattggcaaggcccaccaccaccaa
ccagttcctcccagtcctgaagacatggctgttgtctgcttcaccagtggaaccacaggg
aacccaaagggagccatgctgacacatgggaatgttgcttccaactgctctgccttcatc
aaagtcattgaggatcacctcatattagaccaccacgatgttcatatatcctacctgccc
cttgctcatatgttcgagagagttgtagagggagtcattctggtgcatggggggaggatt
ggtttcttccagggagacatccgcctgctgatggatgacctcaccaccttgaggcctacg
gtgtttcctgtggtgccacgcctcctcaacaggatgttcgacaagatctatgggcaggct
aacacctctctgaagaggtgggtgctggactttgcctttaaaaggaaagaggctgagctg
ctgagtggcatcattaggagggacagcatctgggacaaactcatctttaggaaagtgcag
gccagtctgggaggacgggtgcgtctgatgataacaggtgctgcccccgtgtctgccacg
gtgctgacgttcctgcgagccgcgctgggctgccaattgtatgaggggtatggacagact
gaatgcacagcgggctgcacaatgacagtaccaggggattggacagcaggtcatgttgga
gcgcccctgccatgtaactcggtgaagctggtggatgtggctgagatgaactaccttgct
gccaatggagagggagaggtgtgtgtgaaaggagctaacgtgtttctgggctacttgaag
gacccagagaagacggaggagaccattgatgctaacggctgggtccacacaggggacatt
ggcaagtggttaccgaacggcactttgagaattgtggacaggaagaagcacatcttcaag
ctggcccagggagagtacattgcaccagagaagatagagaatatctacaccaggagtgac
gcagtggcccaggtctttgtgcatggggacagcctacaggcatgcctagtagccatcatt
gtgccagatcctgacttccttcctggctgggccaagaagagaggactggagggatcctac
ggagacctatgcaacaacatggatgtaaagaaggccatcttggaagacatcttgaaacta
ggaaaagacagtggtctgaaatcttttgagcaggtgaaggacatcaccctgttcacagag
atgttctctatccaaaatggacttctcactcccaccctgaaagccaagagagcagaactc
aggaactacttcagggagcagatcgacaaactgtactccaagatcaagatgtaa
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