Oncorhynchus tshawytscha (Chinook salmon): 112256057
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Entry
112256057 CDS
T05605
Name
(RefSeq) peroxisome proliferator-activated receptor gamma coactivator 1-beta
KO
K17962
peroxisome proliferator-activated receptor gamma coactivator 1-beta
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
otw03029
]
112256057
Mitochondrial biogenesis [BR:
otw03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Coactivators
112256057
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
CDC45
Motif
Other DBs
NCBI-GeneID:
112256057
NCBI-ProteinID:
XP_024284777
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Position
LG08:complement(67612480..67712815)
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AA seq
887 aa
AA seq
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MADCVSLLDEELSSFVFNYLTENSGSQYGEEEVCSDRLDADFPDIDLSQLDASDFDSVNC
LSELHWCNDNADISPASIQYSTGDPELFEIEDENAALLAALTDSLDGMVEDEEGGLSVFP
SLREGSEEDLPFPSGSLSPETEDPSLLKRLLLSPPNVPTGLESHKEGSSSSVHRHSSRRL
HMKPVRPLVKRESTHHGRKPRAVRPAGRLCTELHRHLTTTQEAEDTPSADTEEDGEEEED
DDEEDSESEEEEEEEETSSSEGESSTPPEPSKPQFSSEKELHSVVELIKYMHTYCLPIRK
QAIWERKERECPGQVRRARPEYPPARISPNCHKAATQAQICAPRPRHAFTRRREFKANSL
LRELLETVKSFDVSKPYRLHSVPYTHNRGAIPKAAQDRKTETPSPAARSTKPELRKDSES
DRSLEAPKSPDLEDASFSVRRSRRLASFPSRFAKKVRAGRMRVEPVSGAGHLGEEDMAVK
HPMGHDLEKDTTTPNNSTSSQTTADTAEPDNICCQNVKRSCLCLPLTPISTGDTQYANKP
FEQTLSVDLCGTAGLTPPTTPPHKPVEDELFKPEGKGESPPKGSWLSRANSRKFPEQTEL
YAQLRKMGQASDADPKVHQTFGDHDYCLLSLGERRKRTAAMLSHSLFGRSSSEGPEPKGE
KALGGERHGHQREDKLFSKVPEFLSNGTRADSKGDGRRATAASPQSGSPHAKSDEEGERS
SLCSRSPSPILHSSFCQPHSPSSKPDISCENSETCHGDKQGNKISKSGIQIDEDNCQVFY
IHNLPSSVTQIMLRKRFEAFGDPEDCKVITKNEERCGVIKFRQAPSGQQIQKHRREPLFQ
NRGGGMHRLSRKRYIDLDEAGPGPVKSKYDALDFDTLLKEAQKSLHR
NT seq
2664 nt
NT seq
+upstream
nt +downstream
nt
atggcggactgcgtttcactgttagatgaggagctctcttcttttgtcttcaattacctg
acagaaaactcaggcagccagtatggggaggaggaggtctgctcggaccgcttggacgct
gacttccctgatattgacctctctcagctggacgccagcgactttgactcagtcaactgc
ctcagcgagctccactggtgcaacgacaatgccgacatctcccctgcctccatccagtac
agcacaggagaccccgagctctttgagatagaagatgagaatgcggcgctgctggctgct
ctcacagacagcctggacggcatggtggaggacgaggagggggggctgtctgtgtttccc
tcgctgagggaggggtccgaggaggacctccccttcccttcaggctccctgagcccagag
acagaagatccgtctctactgaaaaggctcctgctgtccccccctaatgtgcccacgggc
ctggagtcacacaaagagggcagcagtagcagtgtgcatcgccatagcagccggcgcctg
catatgaaacctgtcaggcctttggttaagcgtgaaagcacacatcatgggcgtaagccc
cgagcggtgcgaccagctggacgtctgtgcacagagctccaccggcacctgaccaccaca
caggaggccgaggacactccttcagctgacacagaggaggacggggaggaggaggaagat
gatgatgaggaggacagtgagtccgaggaggaagaagaagaggaggagacctcgagcagt
gagggtgaaagctctaccccgcctgagccctccaagccccagttctcttcggagaaagaa
ctgcactctgtggtggagctcatcaagtacatgcacacatactgcctccccattcgcaag
caggccatctgggagcgcaaggagcgcgagtgcccaggccaggtacgcagggccaggcct
gagtaccctcctgctcgtatctccccaaactgtcacaaggctgcaacccaggcccagatc
tgcgcccctcggccgcgccacgccttcacccgcagacgggagttcaaagccaactctctt
ctgcgcgaactgctcgaaacggtcaaatcctttgatgtgagcaagccttacagactccac
agcgtcccctacacccataacagaggagctatccccaaagcagcgcaggacagaaagact
gagacccccagtccggctgcccgttcgaccaaaccagagcttagaaaagactcagagagc
gacaggtccctagaggcccctaagagccccgatctggaggacgcgtctttctctgtccgc
cgctcccgcaggctcgcctctttccccagccgctttgccaagaaggtgcgtgcgggccgg
atgagggtggagcctgtgtcgggagccgggcaccttggcgaggaggacatggcggtcaaa
caccccatgggacacgacctagagaaagacaccaccacccctaacaacagtacttcttcc
caaaccacggcagacacagctgaacccgataacatctgctgtcaaaacgtgaaacgcagc
tgcctctgtctgccgctgactcccatatctacaggagatacccagtatgccaacaagcca
tttgagcagactctcagcgtggacctgtgtggcacagcaggcctcacccctcccaccacc
ccccctcacaagcctgtggaggatgagctgttcaagcctgaggggaaaggagagtccccc
ccgaagggttcatggctctcccgggccaactcccgcaagttccccgagcagaccgaactc
tacgctcagctccgcaagatgggccaggccagcgatgcagatcccaaagtccaccagacg
ttcggagaccacgactactgcctgctgagcctgggggagcgtcggaagagaaccgccgcc
atgctgtcccactctctgttcggacgctcttcttctgaagggccagagcctaagggggaa
aaggcgctggggggcgagaggcatggacatcagcgtgaagacaaactcttctccaaggta
ccagagttcctgagtaatggtaccagggctgacagcaagggggacggacggagggcgacc
gcggcatcaccccaatcaggatcgccccatgctaagtcagatgaagagggggagcgctcc
tccctctgctcccgctctccctcccccatcctccactccagcttctgccagccccactcc
cctagcagtaagcctgacatcagctgcgagaactctgagacgtgccacggagacaagcag
gggaacaaaatctccaagtctgggattcaaattgacgaggacaactgccaagtgttctac
attcacaacctgccgagcagcgtcacacaaattatgctgcgcaaacgcttcgaggccttt
ggcgacccagaggactgcaaagtcatcaccaaaaacgaggagcgctgtggagtcatcaag
tttcgtcaagcgcccagtggccagcagatccagaagcacagacgagagccgctcttccag
aacagagggggtggcatgcacaggctcagcaggaagagatacattgatctggacgaagcg
ggtccagggccagtaaagagcaagtatgacgccctggactttgacaccctgctgaaagag
gcccagaagagcctgcatcgctga
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